DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and Gm5141

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001242994.1 Gene:Gm5141 / 380850 MGIID:3779466 Length:581 Species:Mus musculus


Alignment Length:413 Identity:131/413 - (31%)
Similarity:198/413 - (47%) Gaps:53/413 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 ENDKHQTPVGSKEEARELEKEQVPQSAKRTSRRRGVVKQDVPATPPSD-----------AEPSPK 294
            |..::.:.:|...||:.:|:.      .::|||....::...|..||:           |....:
Mouse    35 ETYRNLSALGFSWEAQNIEEH------CQSSRRHRRCERSQSAEKPSEYTQHGKAFAFHAHSHAQ 93

  Fly   295 QH-RLGTQRKLSAPRAGTVNG--PSTT---SGAATTPELKYHCDRCNAGFAVEKSLMIHRRQKGC 353
            :| |:.|: |:.:.....:..  |.|:   ...|.|.:.:|...:|..|||....|..|.|.. .
Mouse    94 RHERIHTE-KIPSEVIHCIEDFLPYTSLQVHKRAQTGQKQYEYKQCGKGFACPSLLKRHERIH-T 156

  Fly   354 INRNYKCNECEKVFVSPDHLAEHQASHGAH---NCPECGIRCDSKEALSKHM-VQGHKRNLRNQ- 413
            :.:.||||:|:|.|.....|..|..:|...   .|.:|      ::|.|.|. :|.|:|....: 
Mouse   157 VEKPYKCNQCDKAFSLKYSLQRHIRTHTGEKPFKCNQC------EKAFSHHCNLQTHRRTHTREK 215

  Fly   414 ---CNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPH 475
               ||.|.|.|:....|::|.|.|||||||.||.|.|:|::..:|::|...|:..|.:||..|..
Mouse   216 PFKCNECDKAFSQFGNLQNHRRTHTGEKPFKCNECDKAFSEKGSLQKHISIHTGEKPYKCNQCDK 280

  Fly   476 SFVTKAELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLK 540
            :|..|..|..|.|.|||:||::|..|...|:....|..|.|.|:||:||.|:||...|:....|:
Mouse   281 AFSHKQSLLIHIRIHTGEKPYKCNQCDKAFSHKHILKNHIRIHSGEKPYKCNLCDKVFSRHFHLQ 345

  Fly   541 NHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGH--- 602
            ||.||||||:||.|..|.|.|:.....|.|::||.||:.:.|..|::.|.....::||:..|   
Mouse   346 NHIRTHTGEKPYRCNQCDKAFSHHKTLQTHRKTHTGEKPFKCNECDKAFSEKGSLQSHIRTHTGE 410

  Fly   603 -----EQHDKRLVHFTFLSNKEN 620
                 .|.||...|      |:|
Mouse   411 KPYKCNQCDKAFSH------KQN 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 7/22 (32%)
COG5048 <357..570 CDD:227381 86/220 (39%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
C2H2 Zn finger 385..406 CDD:275370 6/21 (29%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
zf-H2C2_2 427..451 CDD:290200 15/23 (65%)
C2H2 Zn finger 442..490 CDD:275368 17/47 (36%)
C2H2 Zn finger 470..487 CDD:275368 5/16 (31%)
zf-H2C2_2 482..507 CDD:290200 11/24 (46%)
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
zf-H2C2_2 510..534 CDD:290200 11/23 (48%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 539..563 CDD:290200 15/23 (65%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368 5/19 (26%)
Gm5141NP_001242994.1 KRAB 4..>45 CDD:214630 1/9 (11%)
KRAB 4..43 CDD:279668 1/7 (14%)
C2H2 Zn finger 136..155 CDD:275368 7/18 (39%)
zf-H2C2_2 148..171 CDD:290200 9/23 (39%)
C2H2 Zn finger 163..183 CDD:275368 7/19 (37%)
zf-H2C2_2 175..200 CDD:290200 6/30 (20%)
COG5048 187..566 CDD:227381 93/253 (37%)
C2H2 Zn finger 191..211 CDD:275368 8/25 (32%)
zf-H2C2_2 203..228 CDD:290200 8/24 (33%)
C2H2 Zn finger 219..239 CDD:275368 8/19 (42%)
zf-H2C2_2 231..255 CDD:290200 14/23 (61%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
zf-H2C2_2 259..284 CDD:290200 8/24 (33%)
C2H2 Zn finger 275..295 CDD:275368 7/19 (37%)
zf-H2C2_2 287..312 CDD:290200 11/24 (46%)
C2H2 Zn finger 303..323 CDD:275368 6/19 (32%)
zf-H2C2_2 316..340 CDD:290200 12/23 (52%)
C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
zf-H2C2_2 343..368 CDD:290200 15/24 (63%)
C2H2 Zn finger 359..379 CDD:275368 6/19 (32%)
zf-H2C2_2 372..395 CDD:290200 8/22 (36%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
zf-H2C2_2 399..424 CDD:290200 6/24 (25%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
zf-H2C2_2 427..452 CDD:290200 1/1 (100%)
C2H2 Zn finger 443..463 CDD:275368
zf-H2C2_2 455..480 CDD:290200
C2H2 Zn finger 471..491 CDD:275368
C2H2 Zn finger 499..519 CDD:275368
zf-H2C2_2 511..536 CDD:290200
C2H2 Zn finger 527..547 CDD:275368
zf-H2C2_2 539..564 CDD:290200
C2H2 Zn finger 555..575 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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