DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and Zscan25

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_038945553.1 Gene:Zscan25 / 363872 RGDID:1308619 Length:554 Species:Rattus norvegicus


Alignment Length:363 Identity:110/363 - (30%)
Similarity:149/363 - (41%) Gaps:88/363 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 QENDKHQTPV--------------GSKEEARELEKEQVPQ--SAKR-----TSRRRGVVKQDVPA 283
            :|..:|..|.              |:...|...|||..||  ..||     ||...|.....|| 
  Rat   251 EEEWRHVAPAQIDCFGEYVDSQDCGAPPGAGSKEKEAKPQQEDLKRAFVGLTSDGFGEAAIQVP- 314

  Fly   284 TPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPSTTSGAATTPELKYHCDRCNAGFAVEKSLMIHR 348
            .|....|..|                   .|..|:......|:         .|..:.::|..| 
  Rat   315 VPGGTCEQEP-------------------GGSGTSVPGLPAPQ---------PGVPLPEALSAH- 350

  Fly   349 RQKGCINRNYKCNECEKVFVSPDHLAEHQASH---GAHNCPECGIRCDSKEALSKHMVQGHKRNL 410
               ....:.::|.||.|.|....:|..||.:|   .|..|.|||                     
  Rat   351 ---SSFWKPFQCPECGKGFSRSSNLVRHQRTHEEEKAFGCVECG--------------------- 391

  Fly   411 RNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPH 475
                    |.||:...|..|.|.|.|::|:||..|.|:|:|..:|..|:..|:..|.:||..|..
  Rat   392 --------KGFTLREYLTKHQRTHLGKRPYVCGECWKTFSQRHHLEVHQRSHTGEKPYKCADCWK 448

  Fly   476 SFVTKAELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLK 540
            .|..:..|..|.|||||:||:.|| |...|:.:.:||.|:|.||||:||.|.:|..||:....|.
  Rat   449 GFSRRQHLLVHRRTHTGEKPYTCE-CGKSFSRNANLAVHRRAHTGEKPYGCQVCGKRFSKGERLV 512

  Fly   541 NHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRT-HQGE 577
            .|:|.||||:||.||.|.::|.||.....||:| |:.|
  Rat   513 RHQRIHTGEKPYHCPACGRSFNQRSILNRHQKTQHRQE 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 3/22 (14%)
COG5048 <357..570 CDD:227381 79/215 (37%)
C2H2 Zn finger 360..380 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..406 CDD:275370 4/20 (20%)
C2H2 Zn finger 414..434 CDD:275368 6/19 (32%)
zf-H2C2_2 427..451 CDD:290200 11/23 (48%)
C2H2 Zn finger 442..490 CDD:275368 16/47 (34%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
zf-H2C2_2 482..507 CDD:290200 13/24 (54%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
zf-H2C2_2 510..534 CDD:290200 13/23 (57%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 539..563 CDD:290200 13/23 (57%)
C2H2 Zn finger 554..574 CDD:275368 9/20 (45%)
C2H2 Zn finger 582..602 CDD:275368
Zscan25XP_038945553.1 SCAN 38..120 CDD:396558
KRAB_A-box 241..>269 CDD:413388 3/17 (18%)
COG5048 <348..542 CDD:227381 80/227 (35%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 387..407 CDD:275368 10/48 (21%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
C2H2 Zn finger 471..490 CDD:275368 8/19 (42%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
C2H2 Zn finger 526..545 CDD:275368 8/18 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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