DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and Zfat

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_006241775.1 Gene:Zfat / 362925 RGDID:1310886 Length:1235 Species:Rattus norvegicus


Alignment Length:451 Identity:98/451 - (21%)
Similarity:163/451 - (36%) Gaps:110/451 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 GVVKQD-VPATPPSDAEP-------SPKQHRLGTQ----------RKLSAPRAGTVNGPSTTSGA 321
            |||..| :..|..|.|||       |..|||...|          .|..:....:.:.||.....
  Rat   589 GVVSDDFLLKTDTSSAEPHAAAELTSDTQHRGSAQTQGEEVTLLLAKAKSTGPDSESPPSGGQNV 653

  Fly   322 ATTPELKYHCDRCNAGFAVEKS----------------------------------LMIHRRQKG 352
            ...|..:...:||......|.|                                  .::...||.
  Rat   654 GALPASESDSNRCLRANPAETSDLLPTVADGGDLGVCQPDSCTSSSEHHPGSTAFMKVLDSLQKK 718

  Fly   353 CINR-----------NYKCNECEKVFVSPDHLAEHQASHGAHN---CPECGIRCDSKEALSKHMV 403
            .:|.           :.:|..|.|:|....|...|..:|...:   |.:|.....:|..|.:|::
  Rat   719 QMNTSLCERIRKVYGDLECEYCGKLFWYQVHFDMHVRTHTREHLYYCSQCHYSSITKNCLKRHVI 783

  Fly   404 QGHKRNLRNQC--NICQKVFTMLSTLRDHMRIHT--GEKPFVCNICGKSFTQNANLRQH-KLRHS 463
            |.|. |:..:|  :.|.........|:.|:::||  .::.:.|.:|.|||:::..::.| |..|.
  Rat   784 QKHS-NILLKCPTDGCDYSTPDKYKLQAHLKVHTELDKRSYSCPVCEKSFSEDRLIKSHIKTNHP 847

  Fly   464 ET---------------------KSFKCELCPHSFVTK-AELTSHARTHTGDKPFECEVCLARFT 506
            |.                     ::.||..|...|:.. ::|..|...|.|.|||:|.:|.....
  Rat   848 EVSMNTISEVLGRRVQLKGLIGKRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATR 912

  Fly   507 TSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGE-RPYVCPFCSKTFTQRGDCQMH 570
            :..:|..|..:|:.|:.:.||:|..:|.:...||:|:..||.: :.:.|..|..|..|:.....|
  Rat   913 SKSNLKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTSDGKQFKCTVCDYTAAQKPQLLRH 977

  Fly   571 QRTHQGERIYICPVCNEEFKSMPEMRSHLAGHEQHDKRLVHFTFLSNKEN---GSGALEEE 628
            ...|...:.:.|..|:........::.|.  :.:|          .|:|.   |||.|..|
  Rat   978 MEQHASFKPFRCAHCHYSCNISGSLKRHY--NRKH----------PNEEYANVGSGELAAE 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 6/56 (11%)
COG5048 <357..570 CDD:227381 60/243 (25%)
C2H2 Zn finger 360..380 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..406 CDD:275370 6/20 (30%)
C2H2 Zn finger 414..434 CDD:275368 4/21 (19%)
zf-H2C2_2 427..451 CDD:290200 9/25 (36%)
C2H2 Zn finger 442..490 CDD:275368 15/70 (21%)
C2H2 Zn finger 470..487 CDD:275368 4/17 (24%)
zf-H2C2_2 482..507 CDD:290200 9/24 (38%)
C2H2 Zn finger 498..518 CDD:275368 4/19 (21%)
zf-H2C2_2 510..534 CDD:290200 7/23 (30%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 539..563 CDD:290200 8/24 (33%)
C2H2 Zn finger 554..574 CDD:275368 5/19 (26%)
C2H2 Zn finger 582..602 CDD:275368 3/19 (16%)
ZfatXP_006241775.1 C2H2 Zn finger 272..292 CDD:275368
zf-H2C2_2 284..306 CDD:290200
C2H2 Zn finger 300..320 CDD:275368
C2H2 Zn finger 327..348 CDD:275368
C2H2 Zn finger 355..395 CDD:275368
C2H2 Zn finger 405..425 CDD:275368
C2H2 Zn finger 433..453 CDD:275368
C2H2 Zn finger 459..477 CDD:275368
C2H2 Zn finger 737..757 CDD:275368 6/19 (32%)
C2H2 Zn finger 765..815 CDD:275368 12/50 (24%)
C2H2 Zn finger 825..844 CDD:275368 6/18 (33%)
C2H2 Zn finger 875..896 CDD:275368 5/20 (25%)
C2H2 Zn finger 904..924 CDD:275368 4/19 (21%)
zf-H2C2_2 916..941 CDD:290200 8/24 (33%)
C2H2 Zn finger 932..952 CDD:275368 7/19 (37%)
C2H2 Zn finger 961..981 CDD:275368 5/19 (26%)
C2H2 Zn finger 989..1010 CDD:275368 3/22 (14%)
C2H2 Zn finger 1036..1054 CDD:275368
zf-C2H2 270..292 CDD:278523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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