DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and ZNF546

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_848639.2 Gene:ZNF546 / 339327 HGNCID:28671 Length:836 Species:Homo sapiens


Alignment Length:603 Identity:163/603 - (27%)
Similarity:234/603 - (38%) Gaps:140/603 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 EEPDSKVSISC--------PVATTDQAVQTT--SWEPDRCTASVQTDAVTTTDAEQNTSLIKSTI 140
            ||...:::.||        .:|..|.::..:  .||   |..:||.|.......|..::|:.   
Human    40 EETQGELTSSCGSKTMANVSLAFRDVSIDLSQEEWE---CLDAVQRDLYKDVMLENYSNLVS--- 98

  Fly   141 SVDLDYEGEGEVFDYELPDEPV------EKTTSLILQ--------------VQGNLKDEKEV--V 183
                        ..|.:|...|      ||...::::              :..||..||.|  :
Human    99 ------------LGYTIPKPDVITLLEQEKEPWIVMREGTRNWFTDLEYKYITKNLLSEKNVCKI 151

  Fly   184 F---TQT-----NVIYEGD--------DHELEQQIRE---CNLAIFEGVDNEAEIITVTAPQVTT 229
            :   .||     |.|:|..        .||.|:|.|.   |                        
Human   152 YLSQLQTGEKSKNTIHEDTIFRNGLQCKHEFERQERHQMGC------------------------ 192

  Fly   230 RKSAAKLLTQQENDKHQTPVGSKEEARELEKEQVPQSAKRTSRRRGVVKQDV----PATPPSDAE 290
               .:::|.|::...   |:..|..||  ||....:..::..|::..:.|.:    ...|....|
Human   193 ---VSQMLIQKQISH---PLHPKIHAR--EKSYECKECRKAFRQQSYLIQHLRIHTGERPYKCME 249

  Fly   291 PSPKQHRLGTQRKLSAPRAGTVNGPSTTSGAATTPELKYHCDRCNAGFAVEKSLMIHRRQKGCIN 355
            ......|:|..|......||               |..|.|..|...|.:...|..|:|....: 
Human   250 CGKAFCRVGDLRVHHTIHAG---------------ERPYECKECGKAFRLHYHLTEHQRIHSGV- 298

  Fly   356 RNYKCNECEKVFVSPDHLAEHQASHGA---HNCPECGIRCDSKEALSKHMVQGHKRNLRNQCNIC 417
            :.|:|.||.|.|.....|..||..|..   :.|.|||........|::|. :.|......:|.:|
Human   299 KPYECKECGKAFSRVRDLRVHQTIHAGERPYECKECGKAFRLHYQLTEHQ-RIHTGERPYECKVC 362

  Fly   418 QKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAE 482
            .|.|.:...:..|.:||||.||:.||.|||:|:..:.|.||:..|:..|.::|:.|..||...||
Human   363 GKTFRVQRHISQHQKIHTGVKPYKCNECGKAFSHGSYLVQHQKIHTGEKPYECKECGKSFSFHAE 427

  Fly   483 LTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHT 547
            |..|.|.|||:||:||..|...|.....|.:|.|.||||:||.|..|...|.....|..|.||||
Human   428 LARHRRIHTGEKPYECRECGKAFRLQTELTRHHRTHTGEKPYECKECGKAFICGYQLTLHLRTHT 492

  Fly   548 GERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGHEQH------- 605
            ||.||.|..|.|||:.|.....|.|.|.||:.|||..|.:.|:...|:..|   |..|       
Human   493 GEIPYECKECGKTFSSRYHLTQHYRIHTGEKPYICNECGKAFRLQGELTRH---HRIHTCEKPYE 554

  Fly   606 ----DKRLVHFT-FLSNK 618
                .|..:|.. |:|::
Human   555 CKECGKAFIHSNQFISHQ 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 6/22 (27%)
COG5048 <357..570 CDD:227381 85/215 (40%)
C2H2 Zn finger 360..380 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..406 CDD:275370 6/20 (30%)
C2H2 Zn finger 414..434 CDD:275368 5/19 (26%)
zf-H2C2_2 427..451 CDD:290200 13/23 (57%)
C2H2 Zn finger 442..490 CDD:275368 20/47 (43%)
C2H2 Zn finger 470..487 CDD:275368 7/16 (44%)
zf-H2C2_2 482..507 CDD:290200 13/24 (54%)
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
zf-H2C2_2 510..534 CDD:290200 11/23 (48%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
zf-H2C2_2 539..563 CDD:290200 15/23 (65%)
C2H2 Zn finger 554..574 CDD:275368 8/19 (42%)
C2H2 Zn finger 582..602 CDD:275368 5/19 (26%)
ZNF546NP_848639.2 KRAB 60..120 CDD:214630 15/77 (19%)
KRAB 60..99 CDD:279668 10/56 (18%)
COG5048 <215..375 CDD:227381 39/176 (22%)
C2H2 Zn finger 219..239 CDD:275368 2/19 (11%)
zf-H2C2_2 231..254 CDD:290200 3/22 (14%)
C2H2 Zn finger 247..267 CDD:275368 4/19 (21%)
C2H2 Zn finger 275..295 CDD:275368 6/19 (32%)
zf-H2C2_2 287..312 CDD:290200 9/25 (36%)
C2H2 Zn finger 303..323 CDD:275368 8/19 (42%)
C2H2 Zn finger 331..351 CDD:275368 6/20 (30%)
zf-H2C2_2 344..366 CDD:290200 6/22 (27%)
C2H2 Zn finger 359..379 CDD:275368 5/19 (26%)
zf-H2C2_2 371..396 CDD:290200 13/24 (54%)
COG5048 383..823 CDD:227381 77/193 (40%)
C2H2 Zn finger 387..407 CDD:275368 9/19 (47%)
zf-H2C2_2 399..423 CDD:290200 8/23 (35%)
C2H2 Zn finger 415..435 CDD:275368 9/19 (47%)
zf-H2C2_2 427..450 CDD:290200 12/22 (55%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
zf-H2C2_2 455..478 CDD:290200 11/22 (50%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
C2H2 Zn finger 499..519 CDD:275368 8/19 (42%)
C2H2 Zn finger 527..547 CDD:275368 6/22 (27%)
zf-H2C2_2 539..562 CDD:290200 5/25 (20%)
C2H2 Zn finger 555..575 CDD:275368 4/18 (22%)
C2H2 Zn finger 583..603 CDD:275368
C2H2 Zn finger 611..631 CDD:275368
zf-H2C2_2 623..648 CDD:290200
C2H2 Zn finger 639..659 CDD:275368
zf-H2C2_2 651..676 CDD:290200
C2H2 Zn finger 667..687 CDD:275368
C2H2 Zn finger 695..715 CDD:275368
C2H2 Zn finger 723..743 CDD:275368
C2H2 Zn finger 751..771 CDD:275368
zf-H2C2_2 763..787 CDD:290200
C2H2 Zn finger 779..799 CDD:275368
zf-H2C2_2 791..816 CDD:290200
C2H2 Zn finger 807..827 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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