DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and CG33213

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_788749.1 Gene:CG33213 / 338395 FlyBaseID:FBgn0053213 Length:341 Species:Drosophila melanogaster


Alignment Length:284 Identity:69/284 - (24%)
Similarity:107/284 - (37%) Gaps:48/284 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 VNGPSTTSGAATTPELKYHCDRCN---AGFAVEKSLMIHRRQK-------GCINRNYKCNECEKV 366
            ::.|.|..||..:|:......|.|   ..||.|  .|:.||::       |..:...:|....:.
  Fly    65 LHAPITNGGATESPKKSVQQKRLNEVTGMFANE--AMVPRRERAIQTENAGTKDAGIQCRRDSEE 127

  Fly   367 FVSPDHLAEHQASHGAHNCPECGIRCDSKEALSKHMVQGHKR-----NLRNQCNICQKVFTMLST 426
            :..|:...:...|..:::              .|.:....:.     |...:|.:|..|...|..
  Fly   128 WYLPEERPKDTGSEASNS--------------DKFLTYVSENTFIFPNGMMECAVCGDVAKTLLE 178

  Fly   427 LRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLR------HSETKSFKCE--LCPHSFVTKAEL 483
            .:.||..|.|... :|..||:.......|:||.|.      ...:..|||.  ||.....::.:|
  Fly   179 HQSHMTAHYGPGA-LCFRCGQRLDHQKQLKQHSLSCPALAPRKSSMLFKCPHLLCNAMSHSEMQL 242

  Fly   484 TSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTG 548
            ..|.|.|:|.|.:.|..|...|.|:.||..|::|   |:..|.....:.|...|.|.|.|    |
  Fly   243 LRHLRNHSGRKCYRCLQCKRYFKTTTSLLVHRKK---EQSCAKAKVVVLFREHNGLPNGR----G 300

  Fly   549 ERPYVCPFCSKTFTQRGDCQMHQR 572
            : |..|..|.|.|:....|..|:|
  Fly   301 D-PRRCSVCLKRFSSERVCLRHRR 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 9/32 (28%)
COG5048 <357..570 CDD:227381 53/225 (24%)
C2H2 Zn finger 360..380 CDD:275368 2/19 (11%)
C2H2 Zn finger 385..406 CDD:275370 1/20 (5%)
C2H2 Zn finger 414..434 CDD:275368 6/19 (32%)
zf-H2C2_2 427..451 CDD:290200 7/23 (30%)
C2H2 Zn finger 442..490 CDD:275368 15/55 (27%)
C2H2 Zn finger 470..487 CDD:275368 4/18 (22%)
zf-H2C2_2 482..507 CDD:290200 9/24 (38%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
zf-H2C2_2 510..534 CDD:290200 6/23 (26%)
C2H2 Zn finger 526..546 CDD:275368 5/19 (26%)
zf-H2C2_2 539..563 CDD:290200 9/23 (39%)
C2H2 Zn finger 554..574 CDD:275368 7/19 (37%)
C2H2 Zn finger 582..602 CDD:275368
CG33213NP_788749.1 C2H2 Zn finger 257..292 CDD:275368 11/37 (30%)
C2H2 Zn finger 305..323 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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