DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and CG11696

DIOPT Version :10

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster


Alignment Length:665 Identity:161/665 - (24%)
Similarity:237/665 - (35%) Gaps:156/665 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LADMIREFTKTKPRRNDNLPEKVCLSCLSEISNCYTFKIKCENSSRTL-RQL-LPNALPEEPDSK 91
            ||::|..........||.:...:|..|..:::....|........|:| |.| |...|||.|:  
  Fly    31 LAELIERHLLLVLAENDVVSTCLCNRCWRQLAEIEQFCSMVAEKQRSLHRSLQLKTELPELPE-- 93

  Fly    92 VSISCPVATTDQAVQTTSWEPDRCTASVQTDAVTTTDAEQNTSLIKSTISVDLDYEGEGEVFDYE 156
                    .|:.......|                     ||   :|.|...|.|||: ::.|:.
  Fly    94 --------LTEPEPALVVW---------------------NT---ESPIEPKLSYEGD-DIKDHI 125

  Fly   157 LPDEPVEKTTSLILQVQGNLKDEKEVVFTQTNVIYEGDDHELEQQIRECNLAIFEGVDNEAEIIT 221
            | .|||....|        ..|||:..:..|   :| .|.|.|.|..|         :.|.|...
  Fly   126 L-CEPVIDALS--------AGDEKDSDYGDT---FE-PDFEPESQPDE---------EEEPEPDP 168

  Fly   222 V-TAPQVTTRKSAAKLLTQQENDKHQTPVGSKEEARELEKEQVPQSAKRTSRRR---------GV 276
            | ..|:...||:|.:       ..||......|:.::..|.::.:.:.|.||.|         |.
  Fly   169 VKPRPRGRPRKTALQ-------QTHQIIKRKYEKRKQQNKAKITELSLRESRARQRELKRSSAGA 226

  Fly   277 V-----------KQDV--PATPPSDAEPSP--KQHRLGTQRKLSA-PRAGTVNGPSTTSGAATTP 325
            .           ::||  ..||.:|.:|.|  |:.|..|::.::| ....|...|...|......
  Fly   227 EDDQDGDEDEEDEEDVGGELTPDADEQPKPRGKRGRPKTKKLVTADDNDDTSEVPVKRSSIKEMD 291

  Fly   326 E-----LKYHCDRCNAGFAVEKSLMIHRRQK-------GCINRNYK------------------- 359
            :     :|..|..|.|.......|..|.|.:       .|.|..||                   
  Fly   292 DYIAANVKLDCAICAAPLEDFNDLKRHFRVEHDCTGYVKCCNNRYKKRTLYVDHLHCHKDPQYFS 356

  Fly   360 CNECEKVFVSPDHLAEH------QASHGAHNCPECGIRCDSKEALSKHMVQGHKRNLRNQ-CNIC 417
            |..|.|.|::.:....|      |.....|.|..|..|...|..|:.|: :|||...|.: |:.|
  Fly   357 CQSCRKNFLNRNSQVMHMLRFHSQQQELVHQCAICEARFAKKFLLTMHL-KGHKGTERPEVCDTC 420

  Fly   418 QKVFTMLSTLRDHM-RIHTGE-KPFVCNICGKSFTQNANLRQH-KLRHSE--TKSFKCELCPHSF 477
            .|.|.....|..|: |:|..: .|.:|:|||..|...||...| |..|.:  ....:|.||....
  Fly   421 SKTFRTKFELSAHVKRMHAADFTPIICDICGTHFRSKANFLIHKKALHPDGPVAEVQCTLCGRWL 485

  Fly   478 VTKAELTSHARTH---TGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVL 539
            ..:..|..|...|   .||..:.|.:|.|..::..:|:.|.|.|...:.:.|.||...|.....|
  Fly   486 RDERSLRKHLARHDDRDGDTKYRCLLCNAEKSSRAALSSHMRYHHSAKRHKCSLCDKEFKLPRAL 550

  Fly   540 KNHRRTHTGERPYVCPFCSKTFTQRGDCQMH-QRTHQGE--RIY----------ICPVCNEEFKS 591
            ..|..||||...|.|.||::||....:...| ::.|..:  |.|          ..|:.:....:
  Fly   551 AEHMATHTGIDLYQCQFCTRTFKSHANMHNHKKKMHPNDWVRKYSQPSSSITSTAAPLAHPNHPN 615

  Fly   592 MP----EMRSHLAGH 602
            .|    ...::||||
  Fly   616 QPAPPAAAPTNLAGH 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..78 CDD:214871 10/49 (20%)
C2H2 Zn finger 331..354 CDD:275368 6/29 (21%)
COG5048 <357..570 CDD:227381 69/246 (28%)
C2H2 Zn finger 360..380 CDD:275368 6/25 (24%)
C2H2 Zn finger 385..406 CDD:275370 6/20 (30%)
C2H2 Zn finger 414..434 CDD:275368 7/20 (35%)
C2H2 Zn finger 442..490 CDD:275368 15/50 (30%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
C2H2 Zn finger 554..574 CDD:275368 6/20 (30%)
C2H2 Zn finger 582..602 CDD:275368 4/23 (17%)
CG11696NP_572731.1 zf-AD 2..81 CDD:462262 10/49 (20%)
C2H2 Zn finger 332..349 CDD:275368 3/16 (19%)
C2H2 Zn finger 357..378 CDD:275368 5/20 (25%)
C2H2 Zn finger 388..408 CDD:275368 6/20 (30%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 447..465 CDD:275368 8/17 (47%)
C2H2 Zn finger 478..498 CDD:275368 5/19 (26%)
C2H2 Zn finger 509..529 CDD:275368 6/19 (32%)
zf-H2C2_2 521..545 CDD:463886 7/23 (30%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 565..583 CDD:275368 6/17 (35%)

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