DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and Zfp84

DIOPT Version :10

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_038967513.1 Gene:Zfp84 / 308482 RGDID:1309815 Length:922 Species:Rattus norvegicus


Alignment Length:439 Identity:135/439 - (30%)
Similarity:193/439 - (43%) Gaps:91/439 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 KHQTPVGSKEEARELEKEQVPQSAKRTSR------RRGVV--KQDVP-------ATPPSDA---- 289
            ||  .:..||..:....|:|..|....||      .||::  |.:.|       |.|...|    
  Rat    96 KH--GIFGKESLKWKVTERVGSSCLEESRFGDDWKCRGLLETKLESPDEYLQGVAAPSEKASTEF 158

  Fly   290 -EPSP--KQHRLGTQRKLSAPRAG-------------TVNGPSTTSGAATTPELKY-------HC 331
             :|:|  ......::||.|...||             .:|.....:....|.|:|.       .|
  Rat   159 IQPAPIALSEMTHSERKQSEQEAGETITQQVRIPTSDKLNEMYENAFIYYTDEMKRQQAFAGDRC 223

  Fly   332 DR---CNAGFAVEKSLMIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQASHGAH---NCPECG- 389
            |.   |:.|||.:..|..::..|    :.|:|..|.|:|....:|.:|...|...   .|.||| 
  Rat   224 DELKGCSRGFAYDFQLAPYQINK----KPYQCEICGKIFEKHAYLVQHNRFHTGEKPCECKECGK 284

  Fly   390 -------------IRCDSKEALSKHMVQG---------HKRNLRN----QCNICQKVFTMLSTLR 428
                         :..|.|....||..:.         |:|...|    :|:.|||.|...:.|.
  Rat   285 AFTNCSLLVQHQRVHTDEKPYECKHCGKAFLYFSTFFQHQRTHTNEKPYECHKCQKAFNKSANLT 349

  Fly   429 DHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGD 493
            .|.|||:||||:.||:|||:||..:||..|:..|:..|.::|..|..:|:..:....|.||||.:
  Rat   350 RHQRIHSGEKPYECNLCGKTFTWASNLNDHQKIHTGEKPYECNYCEKAFLCHSAFMKHYRTHTNE 414

  Fly   494 KPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCS 558
            ||:||:.|:..|.....|.:|:|.||||:||.|..|...|...:....|:|.|||||||.|..|.
  Rat   415 KPYECQECMKAFRQKAHLIQHQRVHTGEKPYECKECGKAFACPSYFNRHQRIHTGERPYECKECG 479

  Fly   559 KTFTQRGDCQ---MHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGHEQ 604
            |.|.   ||:   :|||.|.||:.:.|..|::.|:    .||||..|::
  Rat   480 KAFI---DCKTLILHQRIHTGEKPFQCQQCSKAFR----QRSHLTQHQR 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..78 CDD:214871
C2H2 Zn finger 331..354 CDD:275368 8/25 (32%)
COG5048 <357..570 CDD:227381 86/245 (35%)
C2H2 Zn finger 360..380 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..406 CDD:275370 8/43 (19%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
C2H2 Zn finger 442..490 CDD:275368 17/47 (36%)
C2H2 Zn finger 470..487 CDD:275368 3/16 (19%)
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
C2H2 Zn finger 526..546 CDD:275368 5/19 (26%)
C2H2 Zn finger 554..574 CDD:275368 9/22 (41%)
C2H2 Zn finger 582..602 CDD:275368 7/19 (37%)
Zfp84XP_038967513.1 KRAB 14..73 CDD:214630
COG5048 243..607 CDD:227381 101/290 (35%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 4/19 (21%)
C2H2 Zn finger 307..327 CDD:275368 4/19 (21%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 10/19 (53%)
C2H2 Zn finger 391..411 CDD:275368 5/19 (26%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 5/19 (26%)
C2H2 Zn finger 475..495 CDD:275368 9/22 (41%)
COG5048 499..912 CDD:227381 8/27 (30%)
C2H2 Zn finger 503..523 CDD:275368 8/23 (35%)
C2H2 Zn finger 531..551 CDD:275368
C2H2 Zn finger 563..583 CDD:275368
C2H2 Zn finger 591..611 CDD:275368
C2H2 Zn finger 619..639 CDD:275368
C2H2 Zn finger 647..667 CDD:275368
C2H2 Zn finger 675..694 CDD:275368
C2H2 Zn finger 703..723 CDD:275368
C2H2 Zn finger 731..751 CDD:275368
C2H2 Zn finger 759..779 CDD:275368
C2H2 Zn finger 787..807 CDD:275368
C2H2 Zn finger 815..835 CDD:275368
C2H2 Zn finger 843..863 CDD:275368
C2H2 Zn finger 871..891 CDD:275368
C2H2 Zn finger 899..919 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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