DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and Zbtb39

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001124009.1 Gene:Zbtb39 / 299510 RGDID:1306532 Length:711 Species:Rattus norvegicus


Alignment Length:624 Identity:137/624 - (21%)
Similarity:204/624 - (32%) Gaps:190/624 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 RCTASVQTDAVTTTDAEQNTS------LIKSTISVDL-----DYEGEGEVF----DYELPDEPVE 163
            |...|...|..:||.|:..||      :..|..|||.     :..|.||.|    :|.||.:   
  Rat   116 RACHSTFPDLESTTIAKSLTSTSDSPCVTLSCPSVDPTHPLGELRGSGEHFGPDRNYALPTD--- 177

  Fly   164 KTTSLILQVQGNLKDEKEVVFTQTN---------VIYEGDDHELEQQIRECNLAIFEGVDNEAEI 219
                    ..|:.|:|:..:...||         :..:.:||:..        ..|..|.:    
  Rat   178 --------AGGSYKEEERAIAGDTNHSLPLPQVPLPPKSEDHDAP--------VPFTSVPS---- 222

  Fly   220 ITVTAP----------QVTTRKSAAKLLTQQENDKHQTPVGSKEEARELEKEQVPQSAKRTSRR- 273
             .||.|          |.:|..|......|...|..::...:.:.|.::..:..|..:.....| 
  Rat   223 -MVTPPPVLGTVSTGIQTSTTSSCQPYKVQSNGDFGKSNFFTSDNALDITPQTNPCLSNNDQARD 286

  Fly   274 -----------RGVVKQDVPATPPSD-----------AEPSPKQHRLGTQR-----------KLS 305
                       ..:..:|:....|::           ::.|......|..|           |:.
  Rat   287 PGFGQMDELQLEDLGDEDLQFEDPAEDLGTTEEVIELSDDSEDDLAFGDNRENKAMPCQVCKKVL 351

  Fly   306 APRAGTVNGPSTTSGAATTPELK------------------------YHCDRCNAGFAVEKSLMI 346
            .|....:...:.......|...|                        :.||.|...|..:..|.:
  Rat   352 EPNIQLIRQHARDHVDLLTGNCKVCETHFQDRNSRVTHVLSHIGIFLFSCDMCETKFFTQWQLTL 416

  Fly   347 HRRQKGCINRNYKCNECEKVFVSPDHLAEHQ------ASHGAHNCPECGIRCDSKEALSK--HMV 403
            |||. |....|        |.|.|:.....:      |:.....|..||      :||:|  |:|
  Rat   417 HRRD-GIFENN--------VIVHPNEPLSGKLGLFPGAASPELKCAACG------KALAKDFHVV 466

  Fly   404 QGH---KRNLRNQ-CNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHS- 463
            :||   ..:|:.| |::|.:....|.:|..|...|.|...|.|::|..||.....|.:|...|. 
  Rat   467 RGHILEHVSLKGQACSVCDQRHLNLCSLMWHTLSHLGISVFSCSVCASSFVDWHLLEKHMAVHQS 531

  Fly   464 -ETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSCS-------------LAKH 514
             |...|:|.||..||.::|....|...|                 .||             ||..
  Rat   532 LEDVLFRCHLCSQSFRSEAAYRYHVSQH-----------------KCSSGLDPRPAVGLPHLALQ 579

  Fly   515 KRK---------------HTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQR 564
            |||               ..|...|:|.:|..||...:....|||.||||:||.|..|.|.|..|
  Rat   580 KRKLPAEDFLSEELALQGQPGNSKYSCKVCGKRFAHTSEFNYHRRIHTGEKPYQCKVCHKFFRGR 644

  Fly   565 GDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGHE 603
            ...:.|.:||.|..:|.|.||.....::..|..|:..|:
  Rat   645 STIKCHLKTHSGALMYRCTVCGHYSSTLNLMSKHVGVHK 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 9/22 (41%)
COG5048 <357..570 CDD:227381 69/254 (27%)
C2H2 Zn finger 360..380 CDD:275368 4/25 (16%)
C2H2 Zn finger 385..406 CDD:275370 8/22 (36%)
C2H2 Zn finger 414..434 CDD:275368 5/19 (26%)
zf-H2C2_2 427..451 CDD:290200 9/23 (39%)
C2H2 Zn finger 442..490 CDD:275368 16/49 (33%)
C2H2 Zn finger 470..487 CDD:275368 6/16 (38%)
zf-H2C2_2 482..507 CDD:290200 2/24 (8%)
C2H2 Zn finger 498..518 CDD:275368 7/47 (15%)
zf-H2C2_2 510..534 CDD:290200 11/51 (22%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 539..563 CDD:290200 13/23 (57%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368 5/19 (26%)
Zbtb39NP_001124009.1 BTB_POZ_ZBTB39 4..126 CDD:349533 3/9 (33%)
C2H2 Zn finger 344..365 CDD:275368 2/20 (10%)
C2H2 Zn finger 373..393 CDD:275368 1/19 (5%)
C2H2 Zn finger 401..419 CDD:275368 6/17 (35%)
C2H2 Zn finger 452..473 CDD:275368 10/26 (38%)
C2H2 Zn finger 481..501 CDD:275368 5/19 (26%)
C2H2 Zn finger 509..529 CDD:275368 6/19 (32%)
C2H2 Zn finger 539..559 CDD:275368 7/19 (37%)
zf-C2H2 604..626 CDD:395048 8/21 (38%)
C2H2 Zn finger 606..626 CDD:275368 7/19 (37%)
zf-H2C2_2 618..642 CDD:404364 12/23 (52%)
C1 620..>667 CDD:412127 22/46 (48%)
C2H2 Zn finger 634..654 CDD:275368 6/19 (32%)
C2H2 Zn finger 662..682 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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