DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and GTF3A

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_002088.2 Gene:GTF3A / 2971 HGNCID:4662 Length:365 Species:Homo sapiens


Alignment Length:235 Identity:72/235 - (30%)
Similarity:108/235 - (45%) Gaps:22/235 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 PECGIRCDSKEALSKHMVQGHKRNLRNQCNI--CQKVFTMLSTLRDHMRIHTGEKPFVC--NICG 446
            |:|.........|..|:.: |.......|:.  |.|.|.....|..|:..|||||||||  |.|.
Human    45 PDCSANYSKAWKLDAHLCK-HTGERPFVCDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCD 108

  Fly   447 KSFTQNANLRQH--KLRHSETKSFKC--ELCPHSFVTKAELTSHARTHTGDKPFEC--EVCLARF 505
            :.|...:||::|  :...::.|.:.|  |.|..:|....:|..|...||.:..|:|  |.|...|
Human   109 QKFNTKSNLKKHFERKHENQQKQYICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHF 173

  Fly   506 TTSCSLAKHKRKHTGERPYACDL-CP-MRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQ 568
            .:...|.:|.:.|.|   |.|.. |. :..|...:||:.|.||..|  .:|..|.|||.::...:
Human   174 ASPSKLKRHAKAHEG---YVCQKGCSFVAKTWTELLKHVRETHKEE--ILCEVCRKTFKRKDYLK 233

  Fly   569 MHQRTHQGER-IYICP--VCNEEFKSMPEMRSH-LAGHEQ 604
            .|.:||..|| :..||  .|...:.::..::|| |:.||:
Human   234 QHMKTHAPERDVCRCPREGCGRTYTTVFNLQSHILSFHEE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368
COG5048 <357..570 CDD:227381 59/195 (30%)
C2H2 Zn finger 360..380 CDD:275368
C2H2 Zn finger 385..406 CDD:275370 4/19 (21%)
C2H2 Zn finger 414..434 CDD:275368 6/21 (29%)
zf-H2C2_2 427..451 CDD:290200 14/25 (56%)
C2H2 Zn finger 442..490 CDD:275368 14/53 (26%)
C2H2 Zn finger 470..487 CDD:275368 5/18 (28%)
zf-H2C2_2 482..507 CDD:290200 9/26 (35%)
C2H2 Zn finger 498..518 CDD:275368 6/21 (29%)
zf-H2C2_2 510..534 CDD:290200 7/25 (28%)
C2H2 Zn finger 526..546 CDD:275368 6/21 (29%)
zf-H2C2_2 539..563 CDD:290200 11/23 (48%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368 6/22 (27%)
GTF3ANP_002088.2 zinc finger 42..64 4/19 (21%)
C2H2 Zn finger 45..64 CDD:275368 4/19 (21%)
COG5048 <64..187 CDD:227381 38/122 (31%)
zinc finger 72..94 6/21 (29%)
C2H2 Zn finger 72..94 CDD:275368 6/21 (29%)
zinc finger 102..125 7/22 (32%)
C2H2 Zn finger 102..120 CDD:275368 6/17 (35%)
zinc finger 134..156 6/21 (29%)
C2H2 Zn finger 137..156 CDD:275368 5/18 (28%)
zinc finger 164..186 6/21 (29%)
C2H2 Zn finger 164..186 CDD:275368 6/21 (29%)
zinc finger 191..213 6/21 (29%)
zinc finger 219..239 6/19 (32%)
C2H2 Zn finger 219..239 CDD:275368 6/19 (32%)
C2H2 Zn finger 246..271 CDD:275368 6/24 (25%)
zinc finger 248..271 6/22 (27%)
zinc finger 279..301
C2H2 Zn finger 279..301 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149936
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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