DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and ZNF544

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001374339.1 Gene:ZNF544 / 27300 HGNCID:16759 Length:769 Species:Homo sapiens


Alignment Length:640 Identity:167/640 - (26%)
Similarity:248/640 - (38%) Gaps:120/640 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 CLSEISNCYTFKIKCENSSRTLRQLLPNALPEEPDSKVSISCPVATTDQAVQTTSWEPDRCTASV 119
            |..:::..:| :.:.|......|.|......|..:..||:...::.:| .:.....|.|.|.|..
Human    69 CFEDVAMAFT-QEEWEQLDLAQRTLYREVTLETWEHIVSLGLFLSKSD-VISQLEQEEDLCRAEQ 131

  Fly   120 QTDAVTTTDAEQN-----TSLIKSTISVDLDYEGEGEVFDYELPDEPVEKTTSLILQVQGNLKDE 179
            :.........|:|     ....:..:|..::....|       |:||    .||:|   |.::| 
Human   132 EAPRDWKATLEENRLNSEKDRAREELSHHVEVYRSG-------PEEP----PSLVL---GKVQD- 181

  Fly   180 KEVVFTQTNVIYEGDDHELE----------QQIRECNLAIFEG--VDNEAEIITVTAP------- 225
                  |:|.:.|..::.|.          .|...|.|.:..|  :.:...::..|.|       
Human   182 ------QSNQLREHQENSLRFMVLTSERLFAQREHCELELGGGYSLPSTLSLLPTTLPTSTGFPK 240

  Fly   226 ---QVTTRKSAAKLLTQQEN-------DKHQ-----------TPVGSKEEARELEKEQVPQSAKR 269
               ||...|..:..:..::|       :.||           :.:|:.|..::...|.:......
Human   241 PNSQVKELKQNSAFINHEKNGADGKHCESHQCARAFCQSIYLSKLGNVETGKKNPYEYIVSGDSL 305

  Fly   270 T--------SRRRGVVKQD------------VPATPPSDAEPSPKQHRLGTQRKLSAPRAGTV-- 312
            .        .|...|.|.|            |.............|:.....|:..:.....|  
Human   306 NYGSSLCFHGRTFSVKKSDDCKDYGNLFSHSVSLNEQKPVHFGKSQYECDECRETCSESLCLVQT 370

  Fly   313 --NGPSTT-------------------SGAATTPELKYHCDRCNAGFAVEKSLMIHRR-QKGCIN 355
              :||..|                   .....|.|....|::|...|:..|  :||:| ..|  .
Human   371 ERSGPGETPFRCEERCAAFPMASSFSDCNIIQTTEKPSVCNQCGKSFSCCK--LIHQRTHTG--E 431

  Fly   356 RNYKCNECEKVFVSPDHLAEHQASHGA---HNCPECGIRCDSKEALSKHMVQGHKRNLRNQCNIC 417
            :.::|.:|.|.|.....|..||.:|..   :.|..||.....:..|..|. :.|......||..|
Human   432 KPFECTQCGKSFSQSYDLVIHQRTHTGEKPYECDLCGKSFTQRSKLITHQ-RIHTGEKPYQCIEC 495

  Fly   418 QKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAE 482
            :|.|...|.|..|.||||||||:.|..|||||:|:..|..||..|:..|.|||..|..||..|.:
Human   496 RKSFRWNSNLIVHQRIHTGEKPYECTHCGKSFSQSYELVTHKRTHTGEKPFKCTQCGKSFSQKYD 560

  Fly   483 LTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHT 547
            |..|.|||||:||:||.:|...|:.|..|..|:|.||||:||.|..|...|...:.|..|:|.||
Human   561 LVVHQRTHTGEKPYECNLCGKSFSQSSKLITHQRIHTGEKPYQCIECGKSFRWNSNLVIHQRIHT 625

  Fly   548 GERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGH 602
            ||:||.|..|.|:|:|......|:|||.||:.|.|..|.:.|....::..||..|
Human   626 GEKPYDCTHCGKSFSQSYQLVAHKRTHTGEKPYECNECGKAFNRSTQLIRHLQIH 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071 4/23 (17%)
C2H2 Zn finger 331..354 CDD:275368 8/23 (35%)
COG5048 <357..570 CDD:227381 89/215 (41%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
C2H2 Zn finger 385..406 CDD:275370 5/20 (25%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
zf-H2C2_2 427..451 CDD:290200 16/23 (70%)
C2H2 Zn finger 442..490 CDD:275368 22/47 (47%)
C2H2 Zn finger 470..487 CDD:275368 6/16 (38%)
zf-H2C2_2 482..507 CDD:290200 13/24 (54%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
zf-H2C2_2 510..534 CDD:290200 11/23 (48%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
zf-H2C2_2 539..563 CDD:290200 13/23 (57%)
C2H2 Zn finger 554..574 CDD:275368 7/19 (37%)
C2H2 Zn finger 582..602 CDD:275368 5/19 (26%)
ZNF544NP_001374339.1 KRAB 68..127 CDD:214630 11/59 (19%)
C2H2 Zn finger 410..428 CDD:275368 7/19 (37%)
zf-H2C2_2 424..445 CDD:404364 7/22 (32%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
COG5048 460..>753 CDD:227381 94/222 (42%)
C2H2 Zn finger 464..484 CDD:275368 5/20 (25%)
C2H2 Zn finger 492..512 CDD:275368 8/19 (42%)
C2H2 Zn finger 520..540 CDD:275368 10/19 (53%)
C2H2 Zn finger 548..568 CDD:275368 8/19 (42%)
C2H2 Zn finger 576..596 CDD:275368 7/19 (37%)
C2H2 Zn finger 604..624 CDD:275368 6/19 (32%)
C2H2 Zn finger 632..652 CDD:275368 7/19 (37%)
C2H2 Zn finger 660..680 CDD:275368 5/19 (26%)
C2H2 Zn finger 688..708 CDD:275368
C2H2 Zn finger 716..736 CDD:275368
C2H2 Zn finger 744..764 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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