DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6654 and ZNF473

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001006657.1 Gene:ZNF473 / 25888 HGNCID:23239 Length:871 Species:Homo sapiens


Alignment Length:329 Identity:110/329 - (33%)
Similarity:149/329 - (45%) Gaps:48/329 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 TPELKYHCDRCNAGFAVEKSL----MIHRRQK-------GCINRN-------YKCNECEKVFVSP 370
            |.:..|.|..|...|....:|    .:|.|:|       ..:::|       :|||:|||.|...
Human   510 TVKTPYECQECGERFICGSTLKCHESVHAREKQGFFVSGKILDQNPEQKEKCFKCNKCEKTFSCS 574

  Fly   371 DHLAEHQASH----GAHNCPECG------------IRCDSKEALSKHMVQG-------------- 405
            .:|.:|:..|    ....|.:||            .|..|:..|.|...||              
Human   575 KYLTQHERIHTRGVKPFECDQCGKAFGQSTRLIHHQRIHSRVRLYKWGEQGKAISSASLIKLQSF 639

  Fly   406 HKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKC 470
            |.:....:||.|.|.|:..:.|..|..||.||.||.|:.|.:.|||...|.||:..|:..|...|
Human   640 HTKEHPFKCNECGKTFSHSAHLSKHQLIHAGENPFKCSKCDRVFTQRNYLVQHERTHARKKPLVC 704

  Fly   471 ELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTA 535
            ..|..:|...:.|:.|.|.|:|:||:.|:.|...|..|..|.:|:|.||||:||.|..|...||.
Human   705 NECGKTFRQSSCLSKHQRIHSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPYVCQECGKAFTQ 769

  Fly   536 LNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLA 600
            .:.|..|||.||||:||.|..|.|.|.|:.:...|||.|.||:.|.|.||.:.|.....:..||.
Human   770 SSCLSIHRRVHTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPYSCNVCGKAFVLSAHLNQHLR 834

  Fly   601 GHEQ 604
            .|.|
Human   835 VHTQ 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 7/33 (21%)
COG5048 <357..570 CDD:227381 86/249 (35%)
C2H2 Zn finger 360..380 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..406 CDD:275370 9/46 (20%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
zf-H2C2_2 427..451 CDD:290200 11/23 (48%)
C2H2 Zn finger 442..490 CDD:275368 16/47 (34%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
zf-H2C2_2 482..507 CDD:290200 10/24 (42%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
zf-H2C2_2 510..534 CDD:290200 11/23 (48%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 539..563 CDD:290200 14/23 (61%)
C2H2 Zn finger 554..574 CDD:275368 8/19 (42%)
C2H2 Zn finger 582..602 CDD:275368 6/19 (32%)
ZNF473NP_001006657.1 KRAB_A-box 6..45 CDD:143639
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..81
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..164
COG5048 207..614 CDD:227381 24/103 (23%)
C2H2 Zn finger 211..231 CDD:275368
C2H2 Zn finger 239..259 CDD:275368
C2H2 Zn finger 267..286 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..318
Interaction with SLBP/pre-mRNA complex 312..552 9/41 (22%)
C2H2 Zn finger 322..342 CDD:275368
C2H2 Zn finger 349..369 CDD:275368
C2H2 Zn finger 377..397 CDD:275368
C2H2 Zn finger 405..425 CDD:275368
C2H2 Zn finger 433..453 CDD:275368
COG5048 457..860 CDD:227381 110/329 (33%)
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 489..509 CDD:275368
C2H2 Zn finger 517..537 CDD:275368 4/19 (21%)
C2H2 Zn finger 564..584 CDD:275368 8/19 (42%)
C2H2 Zn finger 593..613 CDD:275368 4/19 (21%)
C2H2 Zn finger 648..668 CDD:275368 7/19 (37%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..724 CDD:275368 6/19 (32%)
C2H2 Zn finger 732..752 CDD:275368 7/19 (37%)
C2H2 Zn finger 760..780 CDD:275368 8/19 (42%)
C2H2 Zn finger 788..808 CDD:275368 8/19 (42%)
C2H2 Zn finger 816..836 CDD:275368 6/19 (32%)
C2H2 Zn finger 844..864 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.