DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and Zscan22

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_038956724.1 Gene:Zscan22 / 102553002 RGDID:7606541 Length:495 Species:Rattus norvegicus


Alignment Length:535 Identity:140/535 - (26%)
Similarity:207/535 - (38%) Gaps:151/535 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 IKCENSSR-------TLRQLLPNALPEEPDSKVSISCP---------VATTDQAVQTTSWEP--D 113
            ::.|:||:       .|.|.| .|||.|..:.|...||         |....|.:....|||  |
  Rat    77 LRPESSSKEQMLELLVLEQFL-GALPPEIQAWVGAQCPKSGKEAAVLVEDMTQLLDRRGWEPGMD 140

  Fly   114 RCTASV-QTDAVTTTDAEQNTSLIKSTISVDLDYEGEGEVFDYELPDEPVEKTTSLI--LQVQGN 175
            |..||. |::.......|..|..|..::|      .|..:.....|:...|....|:  |.|:..
  Rat   141 REEASCKQSNTDELEPPEMATETIMGSVS------PESTLAQTCKPENSSESQPELLGALWVKST 199

  Fly   176 LK--DEKEVVFTQTNVIYEGDDHELEQQIRECN-LAIFEGVDNEAEIITVTAPQVTTRKSAAKLL 237
            .:  |.|:.:..:.:...:..|||.:....:|: |..|...|           :.::.:....||
  Rat   200 AQEVDLKKALEPRMDAPNDQPDHESDASGNDCSMLPKFPSED-----------KTSSEEKCGPLL 253

  Fly   238 TQQENDKHQTPVGSKEEARELEKEQVPQSAKRTSRRRGVVKQDVPATPPSDAEPSPKQHRLGTQR 302
                 |....|:.:..|.:..:..:..::.:.||.:                |...|.|      
  Rat   254 -----DNETVPLDTCSEKKSSKDSECMRTLQNTSAQ----------------ETHQKNH------ 291

  Fly   303 KLSAPRAGTVNGPSTTSGAATTPELKYHCDRCNAGFAVEKSLMIHRRQKGCINRNYKCNECEKVF 367
                              :..||                                |.|.||.|||
  Rat   292 ------------------SQKTP--------------------------------YTCIECGKVF 306

  Fly   368 VSPDHLAEHQASH-GA--HNCPECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRD 429
            ....||.:||..| ||  |.|.|||                             |.|:.::.|..
  Rat   307 SRSTHLVQHQVVHTGAKPHACKECG-----------------------------KAFSRVAHLTQ 342

  Fly   430 HMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDK 494
            |.||||||||:.|..|||:|:::.:|.||:..|:..:.::|:.|..:|.....||.|.|.|||:|
  Rat   343 HQRIHTGEKPYKCEECGKTFSRSTHLTQHQRVHTGERPYECDTCGKAFSQSTHLTQHQRIHTGEK 407

  Fly   495 PFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSK 559
            |:.||||...|:...:|.:|.|.|:||:||.|..||..|...:.|..|:||||||:||.|..|.|
  Rat   408 PYRCEVCGKAFSDCSALVRHLRVHSGEKPYRCKDCPKAFAQSSSLIEHQRTHTGEKPYKCSDCGK 472

  Fly   560 TFTQRGDCQMHQRTH 574
            .|::.....||.:.|
  Rat   473 AFSRSSALMMHLKLH 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071 4/18 (22%)
C2H2 Zn finger 331..354 CDD:275368 0/22 (0%)
COG5048 <357..570 CDD:227381 83/215 (39%)
C2H2 Zn finger 360..380 CDD:275368 10/19 (53%)
C2H2 Zn finger 385..406 CDD:275370 4/20 (20%)
C2H2 Zn finger 414..434 CDD:275368 5/19 (26%)
zf-H2C2_2 427..451 CDD:290200 15/23 (65%)
C2H2 Zn finger 442..490 CDD:275368 16/47 (34%)
C2H2 Zn finger 470..487 CDD:275368 5/16 (31%)
zf-H2C2_2 482..507 CDD:290200 14/24 (58%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
zf-H2C2_2 510..534 CDD:290200 11/23 (48%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 539..563 CDD:290200 14/23 (61%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368
Zscan22XP_038956724.1 SCAN 44..128 CDD:396558 14/51 (27%)
COG5048 <272..478 CDD:227381 90/306 (29%)
C2H2 Zn finger 272..291 CDD:275368 4/34 (12%)
C2H2 Zn finger 299..319 CDD:275368 10/19 (53%)
C2H2 Zn finger 327..347 CDD:275368 9/48 (19%)
C2H2 Zn finger 355..375 CDD:275368 8/19 (42%)
C2H2 Zn finger 383..403 CDD:275368 7/19 (37%)
C2H2 Zn finger 411..431 CDD:275368 8/19 (42%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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