DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and Gm14124

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001135882.1 Gene:Gm14124 / 100216455 MGIID:3652002 Length:715 Species:Mus musculus


Alignment Length:354 Identity:126/354 - (35%)
Similarity:171/354 - (48%) Gaps:45/354 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 AEPSPKQH--RLGT-QRKLSAPRAGTVNGPSTT---SGAATTPELKYHCDRCNAGFAVEKSLMIH 347
            |.||..|:  |:.| ::.....:.|.....||.   ...|.|.|..:.|.:|...||.:..|:.|
Mouse   337 ARPSSLQYHKRVHTGEKPYECKQCGKAFACSTVLRRHKRAHTGEKPFECYQCGKSFASKSHLLRH 401

  Fly   348 RR----------------------QKGCINRN-----YKCNECEKVFVSPDHLAEHQASHGA--- 382
            :|                      .|.|..|:     ::||:|.|.|.|..:|..|:..|..   
Mouse   402 KRIHTGEKPYKCDQCGKDFVYHSCIKQCKRRHAGEKPFECNQCGKSFASKSYLLRHKRIHTGEKH 466

  Fly   383 HNCPECGIRCDSKEALSKHMVQGHKR----NLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCN 443
            :.|.:||     |:..|.:.:|.|||    ....:|..|.|.|...|.||.|.|.|||||||.||
Mouse   467 YKCDQCG-----KDFASTYSLQNHKRVHTGEKPYECKQCGKAFACSSKLRSHKRTHTGEKPFECN 526

  Fly   444 ICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTS 508
            .|||||...::|.:||..|:..|.:||:.|...|...:.|..|.|.|||:||:||:.|...|..|
Mouse   527 QCGKSFAIKSHLLRHKRIHTGEKPYKCDQCGKDFARPSSLQYHKRVHTGEKPYECKQCGKAFACS 591

  Fly   509 CSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRT 573
            ..|..|||.||||:||.|:.|...|::.:....|:|||||||||.|..|.|:|..|.:.|||:||
Mouse   592 RRLRIHKRTHTGEKPYECNQCGKAFSSPSGFLYHKRTHTGERPYECNECGKSFIHRSNFQMHKRT 656

  Fly   574 HQGERIYICPVCNEEFKSMPEMRSHLAGH 602
            |.||:.:.|..|.:.|.....:..|...|
Mouse   657 HTGEKPFECDQCGKSFAQNTYLLQHKRVH 685

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 8/44 (18%)
COG5048 <357..570 CDD:227381 92/224 (41%)
C2H2 Zn finger 360..380 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..406 CDD:275370 6/20 (30%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
zf-H2C2_2 427..451 CDD:290200 18/23 (78%)
C2H2 Zn finger 442..490 CDD:275368 19/47 (40%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
zf-H2C2_2 482..507 CDD:290200 12/24 (50%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
zf-H2C2_2 510..534 CDD:290200 12/23 (52%)
C2H2 Zn finger 526..546 CDD:275368 5/19 (26%)
zf-H2C2_2 539..563 CDD:290200 14/23 (61%)
C2H2 Zn finger 554..574 CDD:275368 9/19 (47%)
C2H2 Zn finger 582..602 CDD:275368 4/19 (21%)
Gm14124NP_001135882.1 KRAB 4..>45 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 79..97 CDD:275368
COG5048 87..514 CDD:227381 47/181 (26%)
C2H2 Zn finger 105..125 CDD:275368
zf-H2C2_2 117..142 CDD:290200
C2H2 Zn finger 133..153 CDD:275368
C2H2 Zn finger 161..181 CDD:275368
C2H2 Zn finger 189..209 CDD:275368
zf-H2C2_2 202..226 CDD:290200
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368
C2H2 Zn finger 273..293 CDD:275368
C2H2 Zn finger 301..321 CDD:275368