DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and SRP3

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_176586.1 Gene:SRP3 / 842706 AraportID:AT1G64030 Length:385 Species:Arabidopsis thaliana


Alignment Length:427 Identity:101/427 - (23%)
Similarity:174/427 - (40%) Gaps:98/427 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 QIFKGERDFSLALMKQIREIYP-SGNLFFSPFSTYNAL---------------LLAYFSSSEQTE 81
            :..|.:...::.|...:....| ..|:.|||.|..:|:               :|::..||...|
plant     5 EAMKNQTHVAMILSGHVLSSAPKDSNVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDE 69

  Fly    82 -----RELAQALNLGWALNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNT 141
                 ||||                |...|.|.     .....::::||.:::|:::....||..
plant    70 LKTVFRELA----------------SVVYADRS-----ATGGPKITAANGLWIDKSLPTDPKFKD 113

  Fly   142 LLYGATK----ELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQW 202
            |.....|    .:||:::.|...||:|.|:...|:|.|:|:|....:|..|..:.|||...||.|
plant   114 LFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHHTNNLIKDLLPDGSVTSLTNKIYANALSFKGAW 178

  Fly   203 LSQFKVEETALKPFF-INEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTP 266
            ...|:...|....|: :|.....:.:|......:....| |.  ::::|||:.         .:.
plant   179 KRPFEKYYTRDNDFYLVNGTSVSVPFMSSYENQYVRAYD-GF--KVLRLPYQR---------GSD 231

  Fly   267 ESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALP---QKIE-LSLPKFQFEQRLELTP 327
            ::....||...||: .|..|:.::.::  .|...:.:..:|   .::| ..:|||:.|....:|.
plant   232 DTNRKFSMYFYLPD-KKDGLDDLLEKM--ASTPGFLDSHIPTYRDELEKFRIPKFKIEFGFSVTS 293

  Fly   328 ILSLMGVNTMFTRNATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAAT--------ILLVSR 384
            :|..:|:.:|                    ...|.|.:::||.|:.|||||        :..|  
plant   294 VLDRLGLRSM--------------------SMYHKACVEIDEEGAEAAAATADGDCGCSLDFV-- 336

  Fly   385 SSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDP 421
              ..|....|..:|||:|||.:||..|:||.|...||
plant   337 --EPPKKIDFVADHPFLFLIREEKTGTVLFVGQIFDP 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 99/424 (23%)
SRP3NP_176586.1 serpinP_plants 8..371 CDD:381001 99/422 (23%)

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