DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and AT1G63280

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_176517.1 Gene:AT1G63280 / 842634 AraportID:AT1G63280 Length:120 Species:Arabidopsis thaliana


Alignment Length:120 Identity:31/120 - (25%)
Similarity:52/120 - (43%) Gaps:13/120 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 KEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEM 225
            :|:|.|.:|.|:..|.|:|....:...|:.|..||.|.||.|.::|....|....|. ..:|..:
plant    14 QELNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFH-QGKEVHV 77

  Fly   226 VYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPN 280
            .:|......:.|..| |.  :::.|||:.         ...::|...|:...||:
plant    78 PFMRSYESQYIMACD-GF--KVLGLPYQQ---------GLDDTKRKFSIYFYLPD 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 31/120 (26%)
AT1G63280NP_176517.1 serpin <5..>120 CDD:422956 30/118 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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