DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and AT1G51330

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_175544.1 Gene:AT1G51330 / 841556 AraportID:AT1G51330 Length:193 Species:Arabidopsis thaliana


Alignment Length:144 Identity:37/144 - (25%)
Similarity:62/144 - (43%) Gaps:10/144 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 INVSNKFNTLLYGATKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAY 197
            :::|.:...:::.|.      |..|....|:|.|....|:..|:::|....:|..|:.:..||.|
plant    15 LSLSKEAKEVVHAAV------NGAEEVRMEVNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALY 73

  Fly   198 MKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETH 262
            .||.|.::|....|..|||.:...:|.:|..|.......|....|.:...| |.||..||.....
plant    74 FKGAWENKFGKSMTIHKPFHLVNGKQVLVPFMKSYERKYMKAYNGFKVLRI-LQYRVDYKDTSRQ 137

  Fly   263 ISTPESKSDISMII 276
            .|.   ..|::::|
plant   138 FSI---DMDLNVLI 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 37/144 (26%)
AT1G51330NP_175544.1 SERPIN <11..>139 CDD:294093 34/130 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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