DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and zgc:173729

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001103200.1 Gene:zgc:173729 / 798311 ZFINID:ZDB-GENE-071004-64 Length:439 Species:Danio rerio


Alignment Length:446 Identity:124/446 - (27%)
Similarity:195/446 - (43%) Gaps:82/446 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNL-------------GW 92
            |||.|.|:|.....|||:|:||.|..:||.:....:...|..::.:.|..             ..
Zfish    11 FSLNLFKKISGGNASGNVFYSPVSISSALAMVSLGAKGNTADQMFKVLGFNNPPKPGGATPTPAQ 75

  Fly    93 ALNKQQVLVS-------YTLAQRQ---------------------------------DEFRWRQS 117
            |..|.|:...       ..|.|.|                                 .|.....:
Zfish    76 ATQKPQITCGVKSQHEPQALQQPQKFELPADLKKCPAQPVPGQKAEEQIHSSFNKFMSELNKPGA 140

  Fly   118 PMELSSANRIFVDRTINVSNKF----NTLLYGATKELDFKNDPETGLKEINDWIADKTHNQIRDM 178
            |..||.|||::.::|.....||    .|......:::||||..|.....||.|:...|..:|:|:
Zfish   141 PYVLSLANRLYGEQTYQFLEKFLSDAKTYYAAGLEKVDFKNKSEASRVNINKWVEKNTQEKIKDL 205

  Fly   179 LSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGL 243
            |.|..|...|.|||.||.|.||.|..:|..|.|....|.:|:.:.:.|.|||:...|.:.....:
Zfish   206 LPSGAIDAMTRLVLVNAIYFKGNWEKKFTKEATRDGQFKLNKNQTKPVKMMHQKARFSLASIPEM 270

  Fly   244 QSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNK---ISLNRVISRLNADSVKKWFERA 305
            .||:::|||               :..::||:||||:..:   ..|.::...|..:.:.:|.:.:
Zfish   271 NSQVLELPY---------------AGKNLSMLIILPDQIEDATTGLQKLEKALTYEKLMEWTKPS 320

  Fly   306 L--PQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPIS--LVIDDAQHLAKIK 366
            :  .|::::|||||:.||..::..:|..||:..:|.....  :||....|  ||:....|.|.::
Zfish   321 MMCQQEVQVSLPKFKTEQTYDMKSLLVSMGMEDVFDPQKV--NLTGMSSSNDLVLSKVIHKAFVE 383

  Fly   367 VDEVGSTAAAATILLVSRSSRQPDPTK-FNCNHPFVFLIYDEKVDTILFAGVYSDP 421
            |:|.|:.|||||.::.:.:|....|.| |..:|||:|.|.....:.|||.|.:|.|
Zfish   384 VNEEGTEAAAATGVIATLTSMPLSPPKTFTADHPFIFFIRHNPTNAILFYGRFSSP 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 122/441 (28%)
zgc:173729NP_001103200.1 SERPIN 4..439 CDD:294093 123/444 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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