DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpina3a

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001161177.1 Gene:Serpina3a / 74069 MGIID:1921319 Length:422 Species:Mus musculus


Alignment Length:459 Identity:106/459 - (23%)
Similarity:184/459 - (40%) Gaps:91/459 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVLLALLPVVTIAA---------------------LDKPELSFLNEFSQIFKGERDFSLALMKQI 49
            |::..:.|.:|..|                     ||...|:.:|         .||:.:|.|::
Mouse     9 LLMAGICPAITYWATADGQLGRHTEVQKDRDHEIQLDSVTLASIN---------TDFAFSLYKKL 64

  Fly    50 REIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQAL--------------NLGWALNKQQVL 100
            ....|..|:.|||.|...||.|....:.:.|..|:.:.|              |.|..|   |:|
Mouse    65 ALKNPHKNIVFSPLSISAALALMSLGAKDNTLEEILEGLKFNLTETPEADIHQNFGHLL---QML 126

  Fly   101 VSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLLYGATKELDFKND---PETGLKE 162
            :.            .::.:::::.|.:|:|:.:.:..:|........|...|..|   |....|.
Mouse   127 IQ------------PENQVQINAGNALFIDKHLQILTEFKEKARALYKAEAFTADFQLPREATKL 179

  Fly   163 INDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVY 227
            |||::..:|..:|::::|  ::..:|.:.|.|....:|.|...|..|:|.|..|.::.:....|.
Mouse   180 INDYVRKQTQGKIKELVS--DLHRNTSMALVNFLNFQGFWNVTFDPEDTFLGNFTLDRKRTVNVP 242

  Fly   228 MMH----KTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNR 288
            ||.    .|..|:   ||.:||.:::|.|                ..:.|.:.|||:..:|  ..
Mouse   243 MMKTEELTTNYFR---DEEMQSTVMELNY----------------IGNASFLFILPDQGRI--QH 286

  Fly   289 VISRLNADSVKKWFERALPQKI-ELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPI 352
            |...|...|::||.:...|:.: |||||||...|...|..||..:|:..:|:..|....:|... 
Mouse   287 VEDSLQPQSLRKWRKSLRPRMLDELSLPKFSLSQDYNLNDILPELGIKEVFSTQADLSGITGAK- 350

  Fly   353 SLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGV 417
            ::.:....|.|.:.|.|..:.|...||...:..|.:........:..|::||.|....:|...|.
Mouse   351 NIRVSQMIHQAALDVTETHTEADVITIARYNFQSAKIKAKIVKVDREFLYLILDPMFKSISVMGK 415

  Fly   418 YSDP 421
            ..:|
Mouse   416 VINP 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 97/408 (24%)
Serpina3aNP_001161177.1 serpinA3_A1AC 39..419 CDD:381019 101/427 (24%)

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