DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and SERPINB3

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_008850.1 Gene:SERPINB3 / 6317 HGNCID:10569 Length:390 Species:Homo sapiens


Alignment Length:421 Identity:119/421 - (28%)
Similarity:203/421 - (48%) Gaps:58/421 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGW 92
            :|..|:   ....|...|.:|.|: ....|:|:||.|..:||.:....:.:.|.:::.:.|:.  
Human     1 MNSLSE---ANTKFMFDLFQQFRK-SKENNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHF-- 59

  Fly    93 ALNKQQVL-----------------VSYTLAQRQDEFRWRQSPMELSSANRIFVDRT-------I 133
                .||.                 |.:...:...||.......||..||::|.::|       :
Human    60 ----DQVTENTTGKAATYHVDRSGNVHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYLFLQEYL 120

  Fly   134 NVSNKFNTLLYGATKE-LDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAY 197
            :...||    |..:.| :||.|.||...|:||.|:..:|:.:|::::....|..:|.|||.||.|
Human   121 DAIKKF----YQTSVESVDFANAPEESRKKINSWVESQTNEKIKNLIPEGNIGSNTTLVLVNAIY 181

  Fly   198 MKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETH 262
            .||||..:|..|:|..:.|:.|:...:.:.||.:..:|.....|.:|::::::|    ||.|   
Human   182 FKGQWEKKFNKEDTKEEKFWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIP----YKGK--- 239

  Fly   263 ISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKW--FERALPQKIELSLPKFQFEQRLEL 325
                    |:|||::|||... .|.::..:|.|:.:.:|  .:.....:::|.||:|:.|:..:|
Human   240 --------DLSMIVLLPNEID-GLQKLEEKLTAEKLMEWTSLQNMRETRVDLHLPRFKVEESYDL 295

  Fly   326 TPILSLMGVNTMFTRNATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPD 390
            ...|..||:..:|..:|....:|... .||:....|.|.::|.|.|:.|||||.::...||....
Human   296 KDTLRTMGMVDIFNGDADLSGMTGSR-GLVLSGVLHKAFVEVTEEGAEAAAATAVVGFGSSPTST 359

  Fly   391 PTKFNCNHPFVFLIYDEKVDTILFAGVYSDP 421
            ..:|:|||||:|.|...|.::|||.|.:|.|
Human   360 NEEFHCNHPFLFFIRQNKTNSILFYGRFSSP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 115/407 (28%)
SERPINB3NP_008850.1 serpinB3_B4_SCCA1_2 1..390 CDD:381030 118/419 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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