DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Eb and serping1

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_005166940.5 Gene:serping1 / 567801 ZFINID:ZDB-GENE-030131-1262 Length:652 Species:Danio rerio


Alignment Length:396 Identity:93/396 - (23%)
Similarity:168/396 - (42%) Gaps:55/396 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALN--LGWA-----LNKQ 97
            |||.::..:::......||.|||.|...||......:..:|...|..||.  ||::     |.|.
Zfish   298 DFSTSVYSRLKGSKAKANLIFSPISIAAALSNLLLGARGKTRMHLEGALGLPLGFSCLHTELKKL 362

  Fly    98 QVLVSYTLAQRQDEFRWRQSPMELSSANRIF-------VDRTINVSNKFNTLLYGATKELDFKND 155
            :.::..|                |..|:.||       .:..||.|.:|...:     .....||
Zfish   363 RGVMKDT----------------LKMASAIFYNPEQQLAEAFINQSKEFYEFV-----PQKLTND 406

  Fly   156 PETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINE 220
            ....:..||.|:.:||:.:|..::  :::.|.|..||.||.|..|:|.:.|:......|....:.
Zfish   407 STRNVALINKWVENKTNKKITQLI--DDVDPSTTFVLLNAVYFNGKWKTVFESTNNKEKFTMFSG 469

  Fly   221 REQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKIS 285
            ..:::..:.......:|..::.|::.:.|.|   :......:|..|.:.|:.|.:::..|.|:.:
Zfish   470 ETKDVKTLYSSNYILQMGYNKQLKADVGKFP---LTGQNSLYILVPRTLSEESFLLMENNINRNT 531

  Fly   286 LNRVISRLNADSVKKWFERALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTAD 350
            |..::|.:|         :...|..|::||..:.....::..:|..||::.:|......|....:
Zfish   532 LEEMVSEMN---------QTPAQSAEVTLPAIKLTMTTQVDDLLRNMGLSDLFNNPNLCGMFPGE 587

  Fly   351 PISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFA 415
            |.|. |.|.:|.|.:.:.|.|..|||||.:..|||.     :.|:...|||.:::.::....||.
Zfish   588 PESF-ISDVRHRAFLSLTEKGVEAAAATSISFSRSF-----SSFSALQPFVLILWSDEAAVPLFM 646

  Fly   416 GVYSDP 421
            |...:|
Zfish   647 GRIINP 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 92/394 (23%)
serping1XP_005166940.5 None

Return to query results.
Submit another query.