DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Eb and serpina7

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_021331940.1 Gene:serpina7 / 564060 ZFINID:ZDB-GENE-041010-47 Length:425 Species:Danio rerio


Alignment Length:432 Identity:111/432 - (25%)
Similarity:188/432 - (43%) Gaps:75/432 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LDKPELSFLNEFSQIFKGERDFSLALMKQIREI--YPSGNLFFSPFSTYNALLLAYFSSSEQTER 82
            |.:|.:|  .:...:.....||:..|.|::.|.  |.|.|:||||||...||......:...|::
Zfish    39 LQQPPIS--AKLPSLINMNNDFAFHLYKRLIESPDYQSKNIFFSPFSVSMALSELSLGAGGDTKQ 101

  Fly    83 ELAQALNLGWALNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLLYGAT 147
            :|...:....|:        ::..:....|   .|.:| ...||..||  |:|    .|.||.:.
Zfish   102 QLLSGIGYNSAI--------FSTEEMHQLF---HSLLE-EIGNRTEVD--IDV----GTALYASD 148

  Fly   148 K--------------------ELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVL 192
            :                    .:|| :..|| :.:||.::.:|||.:|...:  :.:...|::.|
Zfish   149 RFKPHSKFLEDMKEFYHSDGFTVDF-SVKET-VDQINKYVEEKTHGKISQAV--DNLEKDTLMFL 209

  Fly   193 ANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYK 257
            ....|.||:|...||.|.|:...|:|:::....|.|||:....|:..|..|.::::.|.|     
Zfish   210 LTYIYFKGKWDKPFKPETTSESTFYIDDKTTVPVQMMHQYEHLKVYYDVELFTKVLCLDY----- 269

  Fly   258 SKETHISTPESKSDISMIIILPN-----SNKISLNRVISRLNADSVKKWFERALPQKIELSLPKF 317
                       ....|||:.:|:     .....|...:||   ..::||......:|:::.:||.
Zfish   270 -----------NDSFSMILAVPDVYMKQKTMKDLEMTVSR---QHIEKWRRSVSERKVDIYVPKL 320

  Fly   318 QFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAATILLV 382
            ..:....|..||..||:..||:..|.|..::.:  ::.:....|.|.:.:||.|:||||.|.:.:
Zfish   321 SLKTSYSLKDILKGMGMTDMFSDKADFTGVSEE--NIFVSKVLHKATLDIDEQGTTAAAVTGVEI 383

  Fly   383 SRSSRQP-DPTKFNCNHPFVFLIYDEKVDTILFAGVYSDPRQ 423
            ..:|..| ...||  :|||:..|.|:..|.|||.|...:|.:
Zfish   384 RPTSYDPLSDLKF--DHPFMIFITDQTNDNILFVGKVVNPNE 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 107/408 (26%)
serpina7XP_021331940.1 alpha-1-antitrypsin_like 54..418 CDD:239011 107/408 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.100

Return to query results.
Submit another query.