DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and serpinf2b

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001073479.1 Gene:serpinf2b / 563663 ZFINID:ZDB-GENE-061215-114 Length:479 Species:Danio rerio


Alignment Length:396 Identity:102/396 - (25%)
Similarity:188/396 - (47%) Gaps:55/396 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQQ 98
            |..|.....|..::.::......|:.|||.|...||......::..||..|...|:       ..
Zfish   104 IGNGIMKLGLLFLENLKPSPDQPNVIFSPLSLSVALSQLALGATNDTEELLLHHLH-------AD 161

  Fly    99 VLVSY--TLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLLYGATKELDFKNDPETGLK 161
            .|..|  .|:.....||.|..|:    |:||::.......:.|   :..:.|..|.:....|.:.
Zfish   162 ALPCYHTALSSLLRNFRKRSMPI----ASRIYLKTGFKAKSDF---MEDSQKLYDSEPATLTDVN 219

  Fly   162 EINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMV 226
            ::|:|:...|:..|.:.|||  :.|..:::|.||.:.||:||::|....|:.:.|:|:|.:...|
Zfish   220 DVNEWVKKVTNGHISEFLSS--LPPSAVMMLINAMHYKGEWLTRFDPHFTSTENFYIDENQIVNV 282

  Fly   227 YMM----HKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLN 287
            .||    :....|  |..| |.:|:.:.|:                |.|.|:::::|.|..::::
Zfish   283 DMMLGPKYPLSVF--THHE-LDAQVARFPF----------------KGDRSLLVVMPTSGHVNVS 328

  Fly   288 RVISRLNADSVKKWFERALPQK--IELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTAD 350
            .:.::||   :...:.| ||::  :::.||||:.:...:|...::.||:..:|: :.....:|..
Zfish   329 AIAAKLN---ISDLYSR-LPRERNMQVKLPKFKLDFNQDLQEAMTSMGLGKLFS-HPKLDRITEG 388

  Fly   351 PISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFA 415
            |  |.:...||::.::::|.|:.|.|||.:::|||:     ..|..|.||.|.:.|:...|.||.
Zfish   389 P--LFVSSVQHMSSVEINEEGAEAVAATSVVISRSN-----PSFTVNQPFFFALMDDLSQTPLFL 446

  Fly   416 GVYSDP 421
            ||.|:|
Zfish   447 GVISNP 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 98/388 (25%)
serpinf2bNP_001073479.1 SERPIN 106..449 CDD:294093 98/389 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.100

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