DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and serpine3

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001116709.1 Gene:serpine3 / 556612 ZFINID:ZDB-GENE-050309-223 Length:417 Species:Danio rerio


Alignment Length:418 Identity:101/418 - (24%)
Similarity:186/418 - (44%) Gaps:51/418 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWA 93
            :.||.:   ...|.::|.:.:.|.....||..||.|....|.|....:...|..:|..  .||:.
Zfish    28 SSFSDL---HTQFGISLYQTLTETENKSNLIVSPASVSLCLGLLQLGARGNTLVQLEG--TLGYD 87

  Fly    94 LNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKF--NTLLYGATK--ELDFKN 154
            :|  .|.|...|::.|.:.......:.|..||.:|:...:.:..:|  :.|.:|.|.  .::|.|
Zfish    88 VN--DVRVQNILSRPQGDLANSSEGLRLQLANALFIQTGVKLLPEFTQHALGWGNTSLLSVNFSN 150

  Fly   155 DPETGLKEINDWI-----ADKTHNQIRDML-----SSEEIT--PHTM-LVLANAAYMKGQWLSQF 206
             |......:..|.     || .|.|.|:.|     ..||.|  .|.: :.|.:.....|.|..||
Zfish   151 -PNHTHSRLQQWAHYQSKAD-DHLQTREELHHSSGEEEEATRQDHLLYMALVSTLVFHGAWQKQF 213

  Fly   207 KVEETALKPFFINEREQEMVYMMHKT-----GAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTP 266
            ...||...||..::.....|.||:::     |.|::..::  :..:::|||              
Zfish   214 LFTETQNLPFTFSDGSTVKVPMMYQSSEVNIGHFRLPSEQ--EYTVLELPY-------------- 262

  Fly   267 ESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKIELSLPKFQFEQRLELTPILSL 331
             ....:.:::.||:..|..|:::..::.|.:|..|.......|:::.||:|:.:.::.|.|:|..
Zfish   263 -LDHSLRLLVALPSDRKTPLSQLEKQITARAVGLWDTGLRRTKMDIFLPRFKMQSKINLKPVLQS 326

  Fly   332 MGVNTMFTRNATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNC 396
            :||:.:|:.:|......:|...:.:.:|.|.|:|:|.|.|:.||:||.:::.:.||.   ..|..
Zfish   327 LGVSDIFSPSAADFRGISDTDGIFVSEAFHEARIEVTEAGTKAASATAMVLLKRSRS---AVFKA 388

  Fly   397 NHPFVFLIYDEKVDTILFAGVYSDPRQM 424
            :.||:|::......::||.|...:|..|
Zfish   389 DRPFLFILRQISTGSLLFIGRVVNPADM 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 97/402 (24%)
serpine3NP_001116709.1 Serpin 35..413 CDD:278507 97/403 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

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