DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and serpinh1a

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001103844.1 Gene:serpinh1a / 555328 ZFINID:ZDB-GENE-080219-21 Length:403 Species:Danio rerio


Alignment Length:436 Identity:98/436 - (22%)
Similarity:181/436 - (41%) Gaps:63/436 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLVLLALLPVV----------TIAALDKPELSFLNEFSQIFKGERDFSLALMKQIREIYPSGNLF 59
            :::||.||..|          |..|.:...|:| |.:..:.| ::|..              |:.
Zfish     5 NVLLLCLLATVSANKTLSSIATTLADNSATLAF-NLYQNMAK-DKDIE--------------NIL 53

  Fly    60 FSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQ-----QVLVSYTLAQRQDEFRWRQSPM 119
            .||....::|.|........|..::...|:.....::|     ..|::.....:.....|:.|..
Zfish    54 ISPVVVASSLGLVALGGKSNTASQVKTVLSAASVKDEQLHSGLSELLTEVSNPKARNVTWKISNR 118

  Fly   120 ELSSANRIFVDRTINVSNK-FNTLLYGATKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEE 183
            ....::..|||..:..|.| :|   |..:| ::|: |..:.:|.||||.:..|..::.::....|
Zfish   119 FYGPSSVSFVDDFLKSSKKHYN---YDHSK-INFR-DKRSAVKAINDWASKSTDGKLPEVTKDVE 178

  Fly   184 ITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQII 248
            .|...|::  ||.:.|..|..||..:....:.|.::......|.|||:||.:....|...:..::
Zfish   179 KTDGAMII--NAMFYKPHWNEQFHHKMVDNRGFLVHRSFTVSVPMMHRTGIYGFLDDTTNKLLVL 241

  Fly   249 KLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQK-IEL 312
            ::|.        .|..:       |:::|:|...: ||.||...|....:..|.. |:.|| :.:
Zfish   242 EMPL--------AHKMS-------SLVLIMPYHVE-SLERVEKLLTRQQLNTWVS-AMEQKAVAI 289

  Fly   313 SLPKFQFEQRLELTPILSLMGVNTMFTR-NATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAA 376
            ||||...|....|...|:.:|:.....: .|...:::... .|.:.:..|.:.::.|..|:....
Zfish   290 SLPKVSMEVSHNLQKHLAELGLTEAVDKAKADLSNISGKK-DLYLSNVFHASAMEWDTEGNPPDT 353

  Fly   377 ATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDPR 422
            :    :..:.:..:|..|..:||||||:.|.|.::|||.|....|:
Zfish   354 S----IFGTDQLKNPKLFYADHPFVFLVKDNKTNSILFMGRLIRPK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 87/394 (22%)
serpinh1aNP_001103844.1 serpin 21..402 CDD:476815 93/420 (22%)

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