DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Eb and serpini2

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001015754.1 Gene:serpini2 / 548471 XenbaseID:XB-GENE-980167 Length:410 Species:Xenopus tropicalis


Alignment Length:396 Identity:100/396 - (25%)
Similarity:175/396 - (44%) Gaps:45/396 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQQVLVSYT 104
            :.::.|.:.|.......|:.|||..|...|.:....:......::.|||.|....:.::.....|
 Frog    33 ELAVDLSRAIHSSCTEENIIFSPLGTSLILGMIKLGARGAALSQIQQALKLQGNQDSEEFSELKT 97

  Fly   105 L----AQRQDEFRWRQSPMELSSANRIFVDRTINVSNKF----NTLLYGATKELDFKNDPETGLK 161
            |    ::...||.:       :.||.:::.....|..::    ..:...|.|.:||: |.:...:
 Frog    98 LLAVISEENKEFTF-------NLANALYLQEGFQVKEQYLHSNRDVFNSAIKLVDFQ-DVKASAE 154

  Fly   162 EINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMV 226
            .|::|:..:||.:|..|.||.:.||.|.:||.||.|.||:|..:|.||.|..:.|.:.......|
 Frog   155 TISEWVQRQTHGKISKMFSSGDFTPLTKMVLVNALYFKGEWKQKFSVEATHSEEFSVKRGLTVKV 219

  Fly   227 YMMH-----KTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSD-ISMIIILPNSNKIS 285
            .|||     |.|.|.:   :....::::|||                |.| .|:::.|| :..:.
 Frog   220 PMMHLQTTTKLGYFSV---KNASYKVLELPY----------------KGDKFSLLLTLP-AEDVE 264

  Fly   286 LNRVISRLNADSVKKWFERALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTAD 350
            :..:...:.|..:|.||.....:.:|:|||:|:.|.:::|......:.:..:|........:|..
 Frog   265 IGELEKIVTATMIKTWFADMKEEVVEISLPRFKVEHKIDLKKSFLNLNITDIFNEGCDLSGITES 329

  Fly   351 PISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFA 415
            | :|.|........::::|.||.|||:|.:.||..|....  :|..|.||:|.|...:...|||.
 Frog   330 P-NLYISKVFQKVFLEINEEGSEAAASTGMQVSAMSMSSH--RFAANRPFLFFIRHIQSGMILFM 391

  Fly   416 GVYSDP 421
            |...:|
 Frog   392 GKVMNP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 99/391 (25%)
serpini2NP_001015754.1 serpin 28..397 CDD:393296 99/394 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.