DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Spn42Da

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster


Alignment Length:431 Identity:120/431 - (27%)
Similarity:198/431 - (45%) Gaps:59/431 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVLLALLPV-------VTIAALDKPELSFLNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPF 63
            |:.|||.|.       ||:|  |.....|....:.       ||:.:..::....|..|:.||||
  Fly    15 LLGLALFPFPPVHTADVTMA--DAAHQEFARRLAL-------FSINVYGKLSGQKPGENIVFSPF 70

  Fly    64 STYNALLLAYFSSSEQTERELAQALNLGWALNKQ------QVLVSYTLAQRQDEFRWRQSPMELS 122
            |......:|...:..:|..:|.|.|.|..:..:|      |||.:|            |....|.
  Fly    71 SIQTCAAMARLGAENETATQLDQGLGLASSDPEQIAHSFHQVLAAY------------QDSQILR 123

  Fly   123 SANRIFVDRTINVSNKFNTLL----YGATKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEE 183
            .||:|||.....:..:|:.||    ..|.:.:||..:.:.. ..||:|:..:|::.|:|::.::.
  Fly   124 IANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAA-ATINNWVEQRTNHLIKDLVPADV 187

  Fly   184 ITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQII 248
            :...:.|||.||.:.||.|..||....|....|.::......|.||.....|:......|.:..:
  Fly   188 LNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKERFRYADLPALDAMAL 252

  Fly   249 KLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKIELS 313
            :|||:               .||:||:|:|||: |..|..:..:|...::.:..:.....|:.|.
  Fly   253 ELPYK---------------DSDLSMLIVLPNT-KTGLPALEEKLRLTTLSQITQSLYETKVALK 301

  Fly   314 LPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAAT 378
            ||:|:.|.::||:.:...:|::.||:..|.||.:...|..|.:....|.|.|:|:|.|:.|||||
  Fly   302 LPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAAT 366

  Fly   379 ILLV--SRSSRQP-DPTKFNCNHPFVFLIYDEKVDTILFAG 416
            .:.|  .|:...| :|.:|..:|||.:::..:| |..||.|
  Fly   367 GMAVRRKRAIMSPEEPIEFFADHPFTYVLVHQK-DLPLFWG 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 110/396 (28%)
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 110/399 (28%)

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