DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and serpina3

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001011275.1 Gene:serpina3 / 496728 XenbaseID:XB-GENE-5933441 Length:414 Species:Xenopus tropicalis


Alignment Length:422 Identity:114/422 - (27%)
Similarity:188/422 - (44%) Gaps:92/422 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DFSLALMK------QIREIYPSGNLFFSPFS---TYNALLLAYFSSSEQTERELAQALNLGWALN 95
            ||:|.|.|      |..:.....|:.|||.|   .::.|||...|.|.|      |.|: |.:||
 Frog    46 DFALNLYKHLVTKTQAEKESTQKNIVFSPLSILTAFSMLLLGAKSESHQ------QILS-GLSLN 103

  Fly    96 KQQV-----------LVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLLYGATKE 149
            :.||           |:......:.|        :::...|.:||:.|:.:.:.|       .:|
 Frog   104 QTQVPEEDMHEAFEHLLQVLNRPKSD--------LQVKIGNAVFVEDTLKILDSF-------VQE 153

  Fly   150 LD-----------FKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWL 203
            ::           ||| |....|:|||::.:||..:|::::  ::::..|.||:.|......:|.
 Frog   154 IEHHYHAEIFPSHFKN-PAEAEKQINDFVNNKTEGRIQELV--KDLSEATKLVVINFILFNAEWQ 215

  Fly   204 SQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPES 268
            :.|....|..:.|.::|.....|.||.||..::...||.:...:::|||                
 Frog   216 NPFSSFFTHSRQFSVDENTTVEVQMMSKTDLYQFYKDEKIPCSVLQLPY---------------- 264

  Fly   269 KSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKIELSLPKFQFEQRLELTPILSLMG 333
            |::.||:||:|...||  :.|...|:.:::|:|...|.....||.||||.....|:|..||:.||
 Frog   265 KNNASMLIIVPELGKI--HEVEEALSVETLKRWTSSAEKSFFELFLPKFSISSSLKLKDILTDMG 327

  Fly   334 VNTMFTRNATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAA-------TILLVSRSSRQPDP 391
            :..:||..|.|..::.:. .|.:....|.|.:.|.|.|:.||||       |.|:|         
 Frog   328 MGIIFTDAADFSGISENS-RLKLSKVVHKAVLNVAENGTEAAAASAVEGVLTSLMV--------- 382

  Fly   392 TKFNCNHPFVFLIYDEKVDTILFAGVYSDPRQ 423
             :|..:.||:.||..::..:|||.....||.:
 Frog   383 -QFVVDKPFITLICSQEPYSILFMSRVIDPTE 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 112/418 (27%)
serpina3NP_001011275.1 serpinA 43..411 CDD:381073 112/418 (27%)

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