DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and serpinb6

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001007932.1 Gene:serpinb6 / 493311 XenbaseID:XB-GENE-1001870 Length:379 Species:Xenopus tropicalis


Alignment Length:102 Identity:24/102 - (23%)
Similarity:29/102 - (28%) Gaps:43/102 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 DCPEAPAGPPGRPGPDGENGGAGEPGRDGLAGRPGAR----------GSPGPRGPSGNPGADGPA 241
            :..||..|..|:..|     ||.||.....|..|..:          .||..|.|       ||.
 Frog   178 EAEEAIKGLNGQKPP-----GATEPITVKFANNPSQKTNQAILSQLYQSPNRRYP-------GPL 230

  Fly   242 GQLGPQ--------------GGSNVAPSPAGEPGAPG 264
            .|...:              .|.|:       ||.||
 Frog   231 AQQAQRFRFSPMTIDGMTSLAGINI-------PGHPG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 24/102 (24%)
serpinb6NP_001007932.1 serpinB 7..376 CDD:381072 24/102 (24%)

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