DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and serpinb1

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001002653.1 Gene:serpinb1 / 436926 ZFINID:ZDB-GENE-040718-400 Length:380 Species:Danio rerio


Alignment Length:397 Identity:116/397 - (29%)
Similarity:182/397 - (45%) Gaps:44/397 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQQVLVSYTL 105
            |:|.|.:.:......||:||||.|...||.:.|..:...|..|:.:.|:..        .||...
Zfish    11 FALDLYRALSASSAEGNIFFSPLSISAALSMVYLGARGDTAGEMEKVLSFS--------SVSDVH 67

  Fly   106 AQRQDEFRWRQSPME---LSSANRIFVDRTIN-----VSNKFNTLLYGATKELDFKNDPETGLKE 162
            :..:.......||..   |..|||::.::|.:     :|:..| |.:...:.:||....|...:.
Zfish    68 SHFESLISSINSPSASYILRLANRLYGEKTFSFLPEYLSSSLN-LYHADLQAVDFIGASEQSRQL 131

  Fly   163 INDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVY 227
            ||.|:.::|.|:|||:|....:|..|.|.|.||.|.||.||.:|..::|...||.||::|...|.
Zfish   132 INKWVEEQTENKIRDLLKPGMVTGMTRLALVNAIYFKGNWLQRFNAQDTKEMPFKINQKENRPVQ 196

  Fly   228 MMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKIS---LNRV 289
            ||:               |..|.|:..||..:...:..|..|.::||:|:||...:..   |.::
Zfish   197 MMY---------------QKKKFPFNYIYDHRVQVLELPYVKEELSMLILLPEETQDGSDPLLKL 246

  Fly   290 ISRLNADSVKKWFER---ALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLT--A 349
            .|.|..|.:.:|..|   .....|.:.||:|:.|....|..||..||::::|....  .|||  .
Zfish   247 ESELTIDKLHEWTNRNNMDTQTDIIVHLPRFKLEIESSLVEILMGMGMSSVFQEGK--ADLTGMT 309

  Fly   350 DPISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILF 414
            ....|.:....|.|.:.|:|.|:.|||||..:|:....:.:  .|..:|||:|.|.....::|||
Zfish   310 GHGGLFLSAVAHKAFVDVNEEGTEAAAATAAIVAFCMLREE--HFMADHPFLFYIRHNPTNSILF 372

  Fly   415 AGVYSDP 421
            .|.:..|
Zfish   373 FGRFRGP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 115/392 (29%)
serpinb1NP_001002653.1 SERPIN 5..379 CDD:294093 115/395 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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