DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Spn100A

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster


Alignment Length:369 Identity:85/369 - (23%)
Similarity:161/369 - (43%) Gaps:78/369 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 AQRQDEFRWRQSPMELSSANRIFVDRTINVSNKF------NTLLYGATKEL-----DFKNDPETG 159
            |::|..   ::|..|.|....:..:.|:....|.      ..|..|..:::     ..:|..:|.
  Fly   285 AEKQQN---KRSDQEESQIKNLEENETVQEEEKLAKIMAAPALTAGEPEKVRLPLQKLENAVKTA 346

  Fly   160 LKEIND--WIADKTH-------NQIRDMLSSEEIT--------------PHTMLVLANAAYMKGQ 201
            .|:..|  .:|.::|       |..|.:...::||              ..:.::|.|..|.:|.
  Fly   347 AKDGADEIMLALESHLPSVSRVNGARSLFQQDDITSALSANSITGRSAGSKSKMLLFNGLYYRGS 411

  Fly   202 WLSQF-KVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHIST 265
            |.:.| ::.:.:.:.||:...:.....|||..|.|::.....::::::.|||.|           
  Fly   412 WANPFYQLRDGSDEFFFMTNEDAVKAPMMHARGKFQVADLPQVKARVLSLPYET----------- 465

  Fly   266 PESKSDISMIIILPNSNKISLNRVISRLNADS---VKKWFERALPQKIELSLPKFQFEQRLELTP 327
                |..::.|:||:..: .|:.|||:|....   .||.|:.   :::.:|:||||.|:......
  Fly   466 ----SRYALCIVLPDETE-GLSDVISQLQTSDFLLAKKQFQM---KELHISMPKFQVEETSRSEA 522

  Fly   328 ILSLMGVNTMFTR-NATFGDLTADPISLVIDDAQHLAKIKVDEVGSTA---AAATILLVSRSSR- 387
            :|..||:..:|:| .|....|:.|| .:.:|:......::|||.||:|   :|||:...:.|.. 
  Fly   523 MLKQMGLKKVFSRTEAQLSLLSEDP-DVHVDEIVQFVNVRVDEGGSSANSLSAATMQARTPSVES 586

  Fly   388 ------QPDP-----TKFNCNHPFVFLIYDEKVDTILFAG-VYS 419
                  :|:|     .:|..|.||.:.|.|.:...:|.:| :|:
  Fly   587 TVLPVPEPEPELPGVERFEVNRPFAYFIVDCQEQFVLASGKIYT 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 85/369 (23%)
Spn100ANP_651818.1 serpin 41..>146 CDD:476815
serpin <380..627 CDD:381000 66/266 (25%)
Blue background indicates that the domain is not in the aligned region.

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