DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Spn77Bc

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster


Alignment Length:420 Identity:93/420 - (22%)
Similarity:166/420 - (39%) Gaps:87/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQQVLVSYTL 105
            |:|.|::.........|...:||||::.:::.|..:...|.:::...|         .:.|.|..
  Fly    40 FALNLLQMESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVL---------AIYVDYPT 95

  Fly   106 AQRQDEFRWRQSPME---LSSAN-RIFVDR--------TINVSNKFNTLLY------------GA 146
            .:     ||.:....   |:|.| ::|..|        .:.:...:|:::.            |.
  Fly    96 LR-----RWYEDVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEGNVVLREGR 155

  Fly   147 TKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEET 211
            .:.:||......   .|||.|...:|.:|....|.........::....:|.|.:|...|...:|
  Fly   156 PRGVDFDQGASI---IINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWKYPFDKSQT 217

  Fly   212 ALKPFF-INEREQEMVYMMHKTGAFKMTID-EGLQSQIIKLPYRTIYKSKETHISTPESKSDISM 274
            .::.|: ........|.||.:||.:....: :|||:.:::||:               .:.::.|
  Fly   218 KVEQFYNAGGSPAGKVEMMVQTGKYAYVNNVKGLQADVLELPF---------------GEHELVM 267

  Fly   275 IIILPN-SNKISLNRVISRLNADSVKKWFERALPQK----IELSLPKFQFEQRLELTPILSLMGV 334
            |:|||. |.::||  |:.:|....:.:..|.....|    :|:.||||.....|.|...:...|:
  Fly   268 IVILPKPSQRVSL--VLKQLKNLGLHRLLEELEASKNESDVEVKLPKFDTRSVLSLEDTVYEAGL 330

  Fly   335 NTMFTRNATFGDL------TADP---ISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPD 390
            ..:  || .|.||      |.|.   :||.    ...|:|.|||.|...|      |.:.|...:
  Fly   331 TDL--RN-EFADLGRMLIPTGDRGAYLSLY----HQFARIVVDEEGLPNA------VPQKSSGTN 382

  Fly   391 PTKFNCNHPFVFLIYDEKVDTILFAGVYSD 420
            ..||:.|.||.:|:.......::.:||:.:
  Fly   383 NIKFHINRPFAYLVLQRTHKLLIHSGVFRE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 92/416 (22%)
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 92/416 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446249
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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