DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Spn77Bb

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster


Alignment Length:419 Identity:91/419 - (21%)
Similarity:164/419 - (39%) Gaps:84/419 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ELSFLNEFSQI-----FKGERDFSLALMKQIREI---YPSGNLFFSPFSTYNALLLAYFSSSEQT 80
            :|.||..|..:     ::|...:::..::.:..|   ||:...::.....|      ::.:||.|
  Fly     2 KLGFLGLFGMVLMIMFYEGAEGYTVNELRDVLGIYVDYPTLRRWYEDVRAY------HYLNSENT 60

  Fly    81 ERELAQALNLGWALNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLLYG 145
            :                  |.|...|...|     ...:||.......|...:...|.  .|..|
  Fly    61 K------------------LFSLRYAYYDD-----VGDLELVKGYNSVVLEGVGEGNV--VLREG 100

  Fly   146 ATKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEE 210
            ..:.:||......   .|||.|...:|.:|....|.........::....:|.|.:|...|...:
  Fly   101 RPRGVDFDQGASI---IINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWKYPFDKSQ 162

  Fly   211 TALKPFFINE--REQEMVYMMHKTGAFKMTID-EGLQSQIIKLPYRTIYKSKETHISTPESKSDI 272
            |.::.|: |:  .....|.||.:||.:....: :|||:.:::||:               .:.::
  Fly   163 TKVEQFY-NDGGSPAGKVEMMVQTGKYAYVNNVKGLQADVLELPF---------------GEHEL 211

  Fly   273 SMIIILPNSNKISLNRVISRLNADSVKKWFERALPQK----IELSLPKFQFEQRLELTPILSLMG 333
            .||::||.|:: .:|.|:.:|....:.:..|:....|    :|:.||||.....|.|...:...|
  Fly   212 VMIVLLPKSSQ-GVNLVLYQLKNLGLHRLLEKLEASKNETDVEVKLPKFDTRSVLSLEDTVYDAG 275

  Fly   334 VNTMFTRNATFGDLTADPISLVIDDA-------QHLAKIKVDEVGSTAAAATILLVSRSSRQPDP 391
            :..:  || .|.||  |.:.:.|...       ...|:|.|||.|...|      |.:.|...:.
  Fly   276 LTDL--RN-DFADL--DKLLIAIGHRGACLTLYHQFARIVVDEEGLPNA------VPQKSSGKNN 329

  Fly   392 TKFNCNHPFVFLIYDEKVDTILFAGVYSD 420
            .||:.|.||.:|:..:|...::.:||:.:
  Fly   330 IKFHVNRPFAYLVLQKKHKLLIHSGVFRE 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 86/397 (22%)
Spn77BbNP_649206.1 SERPIN 13..356 CDD:238101 86/404 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446248
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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