DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Spn77Ba

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001287128.1 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster


Alignment Length:421 Identity:102/421 - (24%)
Similarity:186/421 - (44%) Gaps:76/421 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IFKGERDFSLALMKQIREIYPSGNLFF--SPFSTYNALLLAYFSSSEQTERELAQALNLGWALNK 96
            |.:|.:||:|.|:::|.......|..|  ||||.::.|:|.|..|..:|..:|.::|.:.  :..
  Fly    72 ISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKSLRIN--VED 134

  Fly    97 QQVLVSYTLAQRQDEFRWRQ------SPMELSSANRIFVDRTINVSNKFNTLLYG---ATKELDF 152
            :::..:|.:        |..      |.:|:::...|:..:...:.|.:...:..   ...|:||
  Fly   135 EKLRGAYKV--------WSSFLNITTSTIEVATLQAIYTGKGYPIKNNYRDAIQNYNVQPMEVDF 191

  Fly   153 KNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTML---------VLANAAYMKGQWLSQFKV 208
            .: |::.::     |.:.|:...|.::      |:|:|         .|.::.|.||||...|..
  Fly   192 YS-PDSVIQ-----INEDTNRTTRGLI------PYTILPQDVYGAKMFLLSSLYFKGQWKFPFNK 244

  Fly   209 EETALKPFFINERE--QEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSD 271
            ..|..:|||....|  .::..|:.:.....::..|||...:::|||.|              :..
  Fly   245 TLTREEPFFSESGEVIGKIPMMVQEANFAYVSNVEGLDGYVLELPYGT--------------QDR 295

  Fly   272 ISMIIILPNSNKISLNRVISRLNADSVKKWFER--------ALPQKIELSLPKFQFEQRLELTPI 328
            ::||::||... ..||.|.:.|.|..::...:|        :...::|:.:|||.......|..:
  Fly   296 LAMIVVLPKRG-FKLNDVANNLKALGLRPILQRLAAFRNRASEDNEVEVMMPKFVTATDFTLKGV 359

  Fly   329 LSLMGVNTMFTRNATFGDLTADPI--SLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDP 391
            |..||:..:|..|....|..:..:  .||:    |..||.|||.|:||.|.|...::..:   .|
  Fly   360 LIQMGIRDLFDENTANLDRMSSGLFAKLVV----HSTKIIVDEQGTTAGAVTEAALANKA---TP 417

  Fly   392 TKFNCNHPFVFLIYDEKVDTILFAGVYSDPR 422
            .||..|.||.::|.::....:||||...:|:
  Fly   418 PKFLLNRPFQYMIVEKATGLLLFAGQVRNPK 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 100/412 (24%)
Spn77BaNP_001287128.1 SERPIN 75..444 CDD:238101 100/412 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446250
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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