DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Spn53F

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster


Alignment Length:438 Identity:96/438 - (21%)
Similarity:166/438 - (37%) Gaps:86/438 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHTFSLVLLAL----------LPVVTIAALDKPELSFLNEFSQIFKGERDFSLALMKQIREIYPS 55
            |:...|:||.:          ||....||:       :|.||                      :
  Fly     1 MYVLLLILLGISRYRAQKNSQLPDELYAAI-------VNSFS----------------------N 36

  Fly    56 GNLFFSPFSTYNALLLAYFSSSEQTERELAQALNL-GWALN----KQQVLVSYT-----LAQRQD 110
            .|:.||.....:::|..|....|....::.:|::. |..|:    |.|.:.:.:     :|:...
  Fly    37 RNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGTHLSEYKPKTQKIFAMSVKKAPVAKSLT 101

  Fly   111 EFRWRQSPMELSSANRIFVDRTINVSNKFNTLLYGATKELDFKNDPETGLKEINDWIADKTHNQI 175
            .|..||: |::|:..|:|:..|           .|..:.:.|..:.   |.|:|.:.:.:...||
  Fly   102 RFYVRQN-MKMSTEYRVFMRHT-----------EGRARNIAFAREQ---LDEVNTFYSHEMGEQI 151

  Fly   176 RDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTID 240
            ..::......|::..:|.||.:....|...|..|.|..:.|.:|..:..|:.|||:...|...|.
  Fly   152 GQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREFRVNATKSVMIPMMHEDSKFAFGIL 216

  Fly   241 EGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPN--SNKISLNRVISRLNADSVKKWFE 303
            ..|               |.|.:..|.|..|:.|::|.|:  ....:|...:..:|..||.:   
  Fly   217 GNL---------------KATAVLVPFSHGDLRMLLIKPDQPDGLAALQMKLQAMNILSVAR--- 263

  Fly   304 RALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLVIDDAQHLAKIKVD 368
            ......:.:.:|||:....|||:|....||:..:|..:.:|..|.....:..||...|:...:..
  Fly   264 NLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDGVIHVVTFEFQ 328

  Fly   369 EVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAG 416
            |.|....:..:...|.:........|...|||.|.|.|.  .:|.|||
  Fly   329 EQGIGTPSTDVGNGSLTHTFNGVKYFLATHPFAFYIIDN--TSIYFAG 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 85/392 (22%)
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 90/414 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446261
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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