DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Eb and Serpinb9

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_006253934.1 Gene:Serpinb9 / 361241 RGDID:1549730 Length:396 Species:Rattus norvegicus


Alignment Length:416 Identity:115/416 - (27%)
Similarity:204/416 - (49%) Gaps:50/416 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DKPELSFLNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELA 85
            |...|..:|..|:   ....|::.|:|.:.:..||.|:.:||.|..:||.:....:..||:.:::
  Rat    16 DPCRLCIMNTLSE---ANGTFAIHLLKMLCQSNPSENVCYSPVSISSALAMVLLGAKGQTQVQIS 77

  Fly    86 QALNLGWALNKQ-------QVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINV--SNKFNT 141
            |||    .|||:       |:|:| .|.:.:.::       .|..|||:|.|:|..:  :.|.:.
  Rat    78 QAL----GLNKEKDLHQGFQLLLS-NLNKPERKY-------SLRVANRLFADKTCELLPTYKESC 130

  Fly   142 LLY--GATKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLS 204
            |.:  ...::|.|....|...|.||.|::.:|..:|.::||...:...|.|||.||.|.||:|..
  Rat   131 LRFYNSEMEQLSFAEAAEESRKHINTWVSKQTEGKIPELLSGGSVDSETRLVLVNALYFKGRWHQ 195

  Fly   205 QFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESK 269
            .|..|.|...||.||:.|:.:|.||.....:.:...:.:|:|::.:||..:              
  Rat   196 PFNKEYTVDMPFKINKNEKRLVQMMCCEDTYNLAHVKEVQAQVLMMPYEGM-------------- 246

  Fly   270 SDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQ--KIELSLPKFQFEQRLELTPILSLM 332
             ::|.:::||: |...|::|.|.|..:.:..|......:  .:|:.||||:.::..::..:...:
  Rat   247 -ELSFVVLLPD-NDGDLSKVESNLTFEKLTAWTNPDFMKNTNVEVFLPKFKLQEDYDMESVFQRL 309

  Fly   333 GVNTMFTRNATFGDLTA--DPISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFN 395
            |:..:|  .....||:|  ...:|.:....|.:.::|:|.|:.||||: .::........|| |.
  Rat   310 GIVDVF--QEAKADLSAMSPERNLCVSKIVHKSLVEVNEEGTEAAAAS-AVIEYCCAAFVPT-FC 370

  Fly   396 CNHPFVFLIYDEKVDTILFAGVYSDP 421
            .:|||:|.|...|.::|||.|.:|.|
  Rat   371 ADHPFLFFIKHNKTNSILFCGRFSSP 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 110/401 (27%)
Serpinb9XP_006253934.1 serpin 23..396 CDD:476815 112/407 (28%)

Return to query results.
Submit another query.