DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Spn42De

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster


Alignment Length:440 Identity:123/440 - (27%)
Similarity:191/440 - (43%) Gaps:72/440 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TFSLVLLALLPVVTIAALDKPELSFLNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFSTYN 67
            |.||:||..|.:.....|:         :|:...||..|:..|..|:.:.....|:.|||.|...
  Fly     6 TCSLLLLQGLNLAMANTLN---------YSKSPAGEAQFASQLFGQLAKSQSGRNIVFSPSSIRT 61

  Fly    68 ALLLAYFSSSEQTERELAQALNLGWALNKQQVLVSYTLAQRQDEF----RWRQSP-----MELSS 123
            .|.|||..:...|..||...|.|..| .|.:|      |::.|:.    :|.::.     .:|..
  Fly    62 GLALAYLGAEGSTADELKLGLGLEGA-GKTEV------AEKLDQLLAKGQWEKASGDEDVPKLKY 119

  Fly   124 ANRIFVDRTINVSNKFNTLL----YGATKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEI 184
            ||||||.:...::..:..|:    ..|.:.::|....:|. |.||.|:.::||.||:|:::.|.:
  Fly   120 ANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTA-KHINSWVEEQTHQQIKDLIAPESL 183

  Fly   185 TPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIK 249
            ...|..:|.||.|.|..|.|.|....|.... |:|.            |..|:::|...|....:
  Fly   184 DADTSAILVNAIYFKADWQSSFPDYATYASD-FVNH------------GGRKVSVDTMSQEDYFR 235

  Fly   250 LPYRTIYKSKETHISTPESKSDISMIIILPNSNK-----------ISLNRVISRLNADSVKKWFE 303
            ....|..|:|.  :..|.:.:||..:||||...:           |.||.:.|:|..        
  Fly   236 FGELTELKAKV--VELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEISSQLRR-------- 290

  Fly   304 RALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLVIDDAQHLAKIKVD 368
                :|:.:.||||:||..:.|...|..:|:..:|:..|....|......|.|.:.:|.|.|:|:
  Fly   291 ----RKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEVN 351

  Fly   369 EVGSTAAAATILLVSRSSRQ--PDPTKFNCNHPFVFLIYDEKVDTILFAG 416
            |.|:||:.||.:.||..|..  .:..:|..:|||.|.|.|  ....||.|
  Fly   352 EKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAIKD--AQNTLFLG 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 115/406 (28%)
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 115/406 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446260
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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