DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and serpinb1l4

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_956235.2 Gene:serpinb1l4 / 335229 ZFINID:ZDB-GENE-030131-7169 Length:433 Species:Danio rerio


Alignment Length:444 Identity:128/444 - (28%)
Similarity:196/444 - (44%) Gaps:84/444 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLG-------------- 91
            |||.|.|:|.....|||:|:||.|..:||.:....:...|..::.:.|...              
Zfish    11 FSLNLFKKISGGNASGNVFYSPVSISSALAMVSLGAKGNTADQMFKVLGFNNPPKPGGATPTPAQ 75

  Fly    92 ------W-----------ALNKQQVL-------------VSYTLAQRQ---------DEFRWRQS 117
                  |           ||.:.|..             |....|:.|         .|.....:
Zfish    76 ATQKPKWTCGVKSQHEPQALQQPQKFELPADLKKCPAQPVPGQKAEEQIHSSFNKLMSELNKPGA 140

  Fly   118 PMELSSANRIFVDRTINVSNKFNT---LLYGA-TKELDFKNDPETGLKEINDWIADKTHNQIRDM 178
            |..||.|||::.::|.....|:.:   ..|.| .:::||||..|.....||.|:...|..:|:|:
Zfish   141 PYVLSLANRLYGEQTYQFLEKYLSDAKKYYAAGLEKVDFKNKSEASCVNINKWVEKNTQEKIKDL 205

  Fly   179 LSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGL 243
            |.|..|...|.|||.||.|.||.|..:|..|.|....|.:|:.:.:.|.|||:...|...:...:
Zfish   206 LPSGAIDAMTRLVLVNAIYFKGNWEKKFPKEATKDGQFKLNKNQTKPVKMMHQKAQFPFVVIPEI 270

  Fly   244 QSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNK---ISLNRVISRLNADSVKKWFERA 305
            .|||::|||               ...::||:||||:..:   ..|.::...|..:.:.:|.:..
Zfish   271 NSQILELPY---------------VGKNLSMLIILPDEIEDATTGLQKLERALTYEKLMQWTKVM 320

  Fly   306 LPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPIS--LVIDDAQHLAKIKVD 368
            ..|::::|||||:.||..::..:|..||:..:|.....  :||....|  ||:....|.|.::|:
Zfish   321 RQQEVQVSLPKFKTEQTYDMKSLLVSMGMEDVFDPQKV--NLTGMSSSNDLVLSKVIHKAFVEVN 383

  Fly   369 EVGSTAAAATILLVS-RSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDP 421
            |.|:.|||||..:|| |:..|    .||.:|||:|.|.....:||||.|.:..|
Zfish   384 EEGTEAAAATGAVVSIRTLAQ----IFNADHPFLFFIRHNSTNTILFYGRFCSP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 127/439 (29%)
serpinb1l4NP_956235.2 SERPIN 4..433 CDD:294093 127/442 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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