DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpinb9b

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001333297.1 Gene:Serpinb9b / 306892 RGDID:1562844 Length:296 Species:Rattus norvegicus


Alignment Length:279 Identity:77/279 - (27%)
Similarity:132/279 - (47%) Gaps:34/279 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 LSSANRIFVDRTINVSNKFN---TLLYGATKE-LDFKNDPETGLKEINDWIADKTHNQIRDMLSS 181
            |..||.||||:|..|...|.   ...|.:..| |.|....|...|.:|.|::.:|..:|.::|..
  Rat    36 LRMANGIFVDKTCEVLPTFKESCLRFYNSEMEQLSFAEAAEESRKHVNTWVSKQTEGKIPELLPD 100

  Fly   182 EEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQ 246
            :.:...|.|||.||.|:|..|..||....|...||.||:.|...|.||::.|.|.....:.:.:.
  Rat   101 DSVDFQTRLVLVNALYLKATWGRQFDEGSTREMPFKINKNETRPVQMMYQEGIFCYKYVKEVPAS 165

  Fly   247 IIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQ--- 308
            ::.:||:               ..::..:::||:.: :.:::|...|..:.:..|.:   |.   
  Rat   166 LLMIPYK---------------GDELCFLVLLPDES-VDISKVEEELTFEKLTAWTQ---PDTMS 211

  Fly   309 --KIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLT--ADPISLVIDDAQHLAKIKVDE 369
              .:|:.||||:.|:..:|..:|..:|:...|  ..|..||:  |...:|.:....|.:.::|:|
  Rat   212 YTHVEVFLPKFKLEEDYDLKSLLQRLGIVDAF--EETKADLSAMAPERNLCVSKFVHKSVVEVNE 274

  Fly   370 VGSTAAAA--TILLVSRSS 386
            .|:.||||  ::.:|..||
  Rat   275 KGTEAAAAASSVNIVPLSS 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 77/279 (28%)
Serpinb9bNP_001333297.1 serpin 7..293 CDD:476815 75/277 (27%)

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