DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpinc1

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:429 Identity:120/429 - (27%)
Similarity:201/429 - (46%) Gaps:48/429 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLLALLPVVT---IAALDKPELSFLNEFSQIF---KGERDFSLALMKQIREIYPSGNLFFSPFST 65
            ||...:|..|   :..|.|....|...|.|..   |.:.|                |:|.||.|.
  Rat    68 VLEQKVPEATNRRVWELSKANSRFATNFYQHLADSKNDND----------------NIFLSPLSI 116

  Fly    66 YNALLLAYFSSSEQTERELAQALNLGWALNKQQVLVSYTLAQRQDE-FRWRQSPMELSSANRIFV 129
            ..|..:....:...|.::|.:.........|....:.:..|:.... :|.......|.||||:|.
  Rat   117 STAFAMTKLGACNNTLKQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSNLVSANRLFG 181

  Fly   130 DRTINVSNKF---NTLLYGA-TKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTML 190
            |:::..:..:   :.::||| .:.||||.:||.....||:|:|:||..:|:|::....|...|.|
  Rat   182 DKSLTFNESYQDVSEIVYGAKLQPLDFKENPEQSRVTINNWVANKTEGRIKDVIPQGAIDELTAL 246

  Fly   191 VLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFK-MTIDEGLQSQIIKLPYRT 254
            ||.|..|.||.|.|:|..|.|..:||...:.:..:|.||::.|.|| ..:.||  :|::::|:: 
  Rat   247 VLVNTIYFKGLWKSKFSPENTRKEPFHKVDGQSCLVPMMYQEGKFKYRRVGEG--TQVLEMPFK- 308

  Fly   255 IYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKIELSLPKFQF 319
                          ..||:|::|||...| ||.:|...|..:.:::|.:......:.:.:|:|:.
  Rat   309 --------------GDDITMVLILPKPEK-SLAKVEQELTPELLQEWLDELSEVMLVVHVPRFRI 358

  Fly   320 EQRLELTPILSLMGVNTMFT--RNATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAATILLV 382
            |....|...|..||:..:|:  ::...|.:......|.:.||.|.|.::|:|.||.|||:|.:::
  Rat   359 EDSFSLKEQLQDMGLVDLFSPEKSQLPGIIAEGRDDLFVSDAFHKAFLEVNEEGSEAAASTSVVI 423

  Fly   383 SRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDP 421
            :..|..|....|..|.||:.||.:..::||:|.|..|:|
  Rat   424 TGRSLNPSRVTFKANRPFLVLIREVALNTIIFMGRVSNP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 110/397 (28%)
Serpinc1NP_001012027.1 serpinC1_AT3 71..464 CDD:381002 118/426 (28%)

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