DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpinb12

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_038946584.1 Gene:Serpinb12 / 304692 RGDID:1566382 Length:423 Species:Rattus norvegicus


Alignment Length:404 Identity:118/404 - (29%)
Similarity:197/404 - (48%) Gaps:56/404 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FSQIFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALN 95
            |:::.|.||       |:..|  ||.....|..|         ....:||.....|.:: |.:.|
  Rat    60 FNELPKDER-------KEPSE--PSSKSKASDSS---------LEGQKQTTASQGQQVS-GESTN 105

  Fly    96 KQQVLVSY--TLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFN---TLLYGATKE-LDFKN 154
            :.::|..:  .|..|.|.   .::...||.|||::.::...:..:::   |..|..|.| :||:.
  Rat   106 EHRLLGCHFGKLLSRIDR---DKAHYTLSMANRLYGEQEFPICPEYSDDITEFYHTTIESVDFQK 167

  Fly   155 DPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFIN 219
            |.|...:|||.|:..::..:|:::...|.|...|:|||.||.|.|.:|..:|..|.|...||.::
  Rat   168 DTEKSREEINFWVESQSQGKIKELFDKEAIDNSTVLVLVNAVYFKAKWEKEFDSENTVDAPFCLS 232

  Fly   220 EREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNS--- 281
            |.|::.|.||::.|.|::...|.||:||:::.|.|               ..:||:::||:|   
  Rat   233 ENEKKTVKMMNQKGQFRIGFIEELQAQILEMKYTT---------------GKLSMLVLLPSSSED 282

  Fly   282 NKISLNRVISRLNADSVKKWF--ERALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATF 344
            |..||..:..::|.:.:..|.  |....:.:.:|.|:|..|...:|..:|..||:..:|  :.|.
  Rat   283 NVKSLQELEKKINHEKLLAWSNPENMSEKPVAISFPQFIMEDSYDLNSVLQDMGIRDVF--DGTK 345

  Fly   345 GDLTA---DPISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYD 406
            .|||.   .| ||.:....|...::|||:|:.||||:..:|:..: .|...:||.|.||:|.|..
  Rat   346 ADLTGISKSP-SLHLSKVVHKTFVEVDEMGTQAAAASGAVVAEKA-LPSRVEFNANRPFLFFIRH 408

  Fly   407 EKVDTILFAG-VYS 419
            ....::||.| |||
  Rat   409 NGTQSLLFCGRVYS 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 113/395 (29%)
Serpinb12XP_038946584.1 serpinB12_yukopin 1..423 CDD:381037 118/404 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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