DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpina6

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001009663.1 Gene:Serpina6 / 299270 RGDID:1595901 Length:396 Species:Rattus norvegicus


Alignment Length:405 Identity:91/405 - (22%)
Similarity:173/405 - (42%) Gaps:74/405 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NEFSQIFKG----ERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAY-------------FSS 76
            ||.|...:|    ..||:..|.:::..:.|..|...||.|...||.:..             |:.
  Rat    25 NESSNSHRGLAPTNVDFAFNLYQRLVALNPDKNTLISPVSISMALAMVSLGSAQTQSLQSLGFNL 89

  Fly    77 SEQTERELAQALNLGWALNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKF-- 139
            :|.:|.|:.|:..          .::|.|.|       ..:.:|::..|.:|:.:.:.:.:.|  
  Rat    90 TETSEAEIHQSFQ----------YLNYLLKQ-------SDTGLEMNMGNAMFLLQKLKLKDSFLA 137

  Fly   140 NTLLYGATKEL--DFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQW 202
            :...|..::.|  ||: |.....::||..:.|||..:|..:.|  ::......:|.|..:::|.|
  Rat   138 DVKQYYESEALAIDFE-DWTKASQQINQHVKDKTQGKIEHVFS--DLDSPASFILVNYIFLRGIW 199

  Fly   203 LSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPE 267
            ...|..|.|..:.|::||.....|.||.::|:.....|.....|:|::.|               
  Rat   200 ELPFSPENTREEDFYVNETSTVKVPMMVQSGSIGYFRDSVFPCQLIQMDY--------------- 249

  Fly   268 SKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKIELSLPKFQFEQRLELTPILSLM 332
             ..:.:...|||:..:  ::.||:.|:.|::.:|.:...|:::.|.:|||......:|..:|..:
  Rat   250 -VGNGTAFFILPDQGQ--MDTVIAALSRDTIDRWGKLMTPRQVNLYIPKFSISDTYDLKDMLEDL 311

  Fly   333 GVNTMFTRNATFGDLTAD-PISLVIDDAQHLAKIKVDE----VGSTAAAATILLVSRSSRQPDPT 392
            .:..:.|..:.|...|.| |::|.:   .|.|.:::||    ..||..|...|       :.:|.
  Rat   312 NIKDLLTNQSDFSGNTKDVPLTLTM---VHKAMLQLDEGNVLPNSTNGAPLHL-------RSEPL 366

  Fly   393 KFNCNHPFVFLIYDE 407
            ....|.||:.|::|:
  Rat   367 DIKFNKPFILLLFDK 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 88/400 (22%)
Serpina6NP_001009663.1 serpinA6_CBG 28..396 CDD:381022 89/402 (22%)

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