DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Eb and Serpinh1

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_058869.2 Gene:Serpinh1 / 29345 RGDID:69302 Length:417 Species:Rattus norvegicus


Alignment Length:452 Identity:95/452 - (21%)
Similarity:175/452 - (38%) Gaps:73/452 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHTFSLVLLALLPVVTIAALDKP----------ELSFLNEFSQIFKGERDFSLALMKQIREIYPS 55
            |.:..|..|.||.|...|.:.||          :||  ::.:.:.:.....:.:|.:.:.:....
  Rat     1 MRSLLLGTLCLLAVALAAEVKKPVEATAPGTAEKLS--SKATTLAERSTGLAFSLYQAMAKDQAV 63

  Fly    56 GNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQQVLVSYTLAQRQDEFRWRQSPME 120
            .|:..||....::|.|........|            |...:.||.:..|  |.:|.......:.
  Rat    64 ENILLSPLVVASSLGLVSLGGKATT------------ASQAKAVLSAEKL--RDEEVHTGLGELL 114

  Fly   121 LSSANRIFVDRTINVSNKFNTLLYGAT--------------------KELDFKNDPETGLKEIND 165
            .|.:|    ....||:.|..:.|||.:                    .:::|: |..:.|:.||:
  Rat   115 RSLSN----STARNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFR-DKRSALQSINE 174

  Fly   166 WIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMH 230
            |.:..|..::.::....|.|...:||  ||.:.|..|..:|..:....:.|.:.......|.|||
  Rat   175 WASQTTDGKLPEVTKDVERTDGALLV--NAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVTMMH 237

  Fly   231 KTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNA 295
            :||.:....||..:.|::::|.        .|..:       |:||::|:..: .|.|:...|..
  Rat   238 RTGLYNYYDDEKEKLQLVEMPL--------AHKLS-------SLIILMPHHVE-PLERLEKLLTK 286

  Fly   296 DSVKKWFERALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLVIDDAQ 360
            :.:|.|..:...:.:.:||||...|...:|...|:.:|:.....:|.......:....|.:....
  Rat   287 EQLKTWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRMSGKKDLYLASVF 351

  Fly   361 HLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDPR 422
            |....:.|..|:.....   :..|...: .|..|..:|||:||:.|.:..::||.|....|:
  Rat   352 HATAFEWDTEGNPFDQD---IYGREELR-SPKLFYADHPFIFLVRDNQSGSLLFIGRLVRPK 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 83/406 (20%)
Serpinh1NP_058869.2 serpinH1_CBP1 35..416 CDD:381003 86/418 (21%)
Prevents secretion from ER. /evidence=ECO:0000305 414..417
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.