DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpinf1

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_808788.1 Gene:Serpinf1 / 287526 RGDID:631369 Length:418 Species:Rattus norvegicus


Alignment Length:386 Identity:94/386 - (24%)
Similarity:162/386 - (41%) Gaps:64/386 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNK------QQVLVSYTLAQRQDEFR 113
            :||:..||.|...||......:.::||..:.:||......|.      :::|.|.|..::     
  Rat    75 TGNILLSPLSVATALSALSLGAEQRTESVIHRALYYDLINNPDIHSTYKELLASVTAPEK----- 134

  Fly   114 WRQSPMELSSANRIFVDRTINVSNKFNTLL---YGATKELDFKNDPETGLKEINDWIADKTHNQI 175
                  ...||:||..:|.:.|.:.|...|   || |:......:|...|:|||:|:..:...:|
  Rat   135 ------NFKSASRIVFERKLRVKSSFVAPLEKSYG-TRPRILTGNPRIDLQEINNWVQAQMKGKI 192

  Fly   176 RDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGA-FKMTI 239
              ..|:.|:.....::|...||.||||.::|...:|.|:.|.::|.....|.||....| .:..:
  Rat   193 --ARSTREMPSALSILLLGVAYFKGQWATKFDSRKTTLQDFHLDEDRTVRVPMMSDPKAILRYGL 255

  Fly   240 DEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFER 304
            |..|..:|.:||.                ...:|:|..||.:...:|..:...|.::.|.. .:|
  Rat   256 DSDLNCKIAQLPL----------------TGSMSIIFFLPLTVTQNLTMIEESLTSEFVHD-IDR 303

  Fly   305 ALPQ-KIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLVIDDAQHLAKIKVD 368
            .|.. :..|::||.:.....::|..|..|.:.::| .:..|..:|..|:.|.  ..:|.|..:.:
  Rat   304 ELKTIQAVLTVPKLKLSYEGDVTNSLQDMKLQSLF-ESPDFSKITGKPVKLT--QVEHRAAFEWN 365

  Fly   369 EVGSTAAAATILLVSRSSRQPD--------PTKFNCNHPFVFLIYDEKVDTILFAGVYSDP 421
            |.|           :.:|..||        |..::.|.||:|::.|.....:||.|...||
  Rat   366 EEG-----------AGTSSNPDLQPVRLTFPLDYHLNRPFIFVLRDTDTGALLFIGRILDP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 92/384 (24%)
Serpinf1NP_808788.1 serpinF1_PEDF 41..413 CDD:381008 92/382 (24%)

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