DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and HMSD

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_016881199.1 Gene:HMSD / 284293 HGNCID:23037 Length:217 Species:Homo sapiens


Alignment Length:148 Identity:39/148 - (26%)
Similarity:60/148 - (40%) Gaps:46/148 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 STYNALLLAYFSSSEQTERELAQALNLGWALNK------------QQVLVSYTLAQRQDEFRWRQ 116
            |..:||.:.:..:...|..:::|||    ..:|            |.:||:   ..|.|      
Human     2 SISSALAMVFMGAKGNTAAQMSQAL----CFSKIGGEDGDIHRGFQSLLVA---INRTD------ 53

  Fly   117 SPMELSSANRIFVDRTINVSNKFNT---LLYGAT-KELDFKNDPETGLKEINDWIADKT------ 171
            :...|.:||.:|.:::.:....|..   ..|.|| |:|||.||.|.....:|.|:||||      
Human    54 TEYVLRTANGLFGEKSYDFLTGFTDSCGKFYQATIKQLDFVNDTEKSTTRVNSWVADKTKVHKGT 118

  Fly   172 --HNQIRDMLSSEEITPH 187
              |:|.|         ||
Human   119 KKHHQQR---------PH 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 39/148 (26%)
HMSDXP_016881199.1 serpin 1..>113 CDD:476815 33/123 (27%)

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