DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpinb1b

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_766640.1 Gene:Serpinb1b / 282663 MGIID:2445361 Length:382 Species:Mus musculus


Alignment Length:395 Identity:107/395 - (27%)
Similarity:186/395 - (47%) Gaps:37/395 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQQVLVSYTL 105
            |:|.|...::|..|:||:||||||..::|.:.:..:...|..:|::.|:.....:......|.|.
Mouse    11 FTLELFHTLKESSPTGNIFFSPFSISSSLAMVFLGAKGSTAAQLSKTLHFDSVEDIHSCFQSLTA 75

  Fly   106 AQRQDEFRWRQSPMELSSANRIFVDRTINVSNKF---NTLLYGA-TKELDFKNDPETGLKEINDW 166
                 |.....:...|..|||::.::|.|...:|   ...:|.| ...:||::..|...||||.|
Mouse    76 -----EVSKLGASHTLKLANRLYGEKTYNFLPEFLASTQKMYSADLAAVDFQHASEDARKEINQW 135

  Fly   167 IADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHK 231
            :..:|..:|.::|:...:...|.|||.||.|.||.|..||...||...||.:|:::.:.|.||::
Mouse   136 VKGQTEGKIPELLAKGVVDSMTKLVLVNAIYFKGIWEEQFMTRETINAPFRLNKKDTKTVKMMYQ 200

  Fly   232 TGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILP---NSNKISLNRVISRL 293
            ...|.......|:.:::::||:               ..::||:|:||   ......|.::..:|
Mouse   201 KKKFPFGYISDLKCKVLEMPYQ---------------GGELSMVILLPEDIEDESTGLKKIEEQL 250

  Fly   294 NADSVKKWFERALPQKIE--LSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLT--ADPISL 354
            ....:.:|.:....:.|:  :.||:|:.|:...|...|..:||..:|:...  .||:  :....|
Mouse   251 TLGKLHEWTKHENLRNIDVHVKLPRFKMEESYILNSNLCCLGVQDLFSSGK--ADLSGMSGSRDL 313

  Fly   355 VIDDAQHLAKIKVDEVGSTAAAAT--ILLVSRSSRQPDPTK-FNCNHPFVFLIYDEKVDTILFAG 416
            .:....|.:.:.|:|.|:.|||||  |:.| ...:.|.|.: |..:|||:|.|.......::|.|
Mouse   314 FVSKIVHKSFVDVNEQGTEAAAATGGIIQV-LCEKMPTPQEVFTVDHPFLFFIRHNPTANMIFFG 377

  Fly   417 VYSDP 421
            ....|
Mouse   378 RVCSP 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 106/393 (27%)
Serpinb1bNP_766640.1 serpinB1_LEI 1..382 CDD:381028 106/393 (27%)
CARD-binding motif (CBM). /evidence=ECO:0000250|UniProtKB:P30740 352..382 8/29 (28%)

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