DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpinb9d

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_035590.1 Gene:Serpinb9d / 20726 MGIID:894667 Length:377 Species:Mus musculus


Alignment Length:418 Identity:111/418 - (26%)
Similarity:192/418 - (45%) Gaps:65/418 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNL-- 90
            :|..||   ....|::.|:|.:.:..||.|:.|||.|..:||.:....:...|..::.|||:|  
Mouse     1 MNTLSQ---ANGTFAIHLLKVLCQDNPSENVCFSPMSISSALAMVLLGAKGNTVTQICQALHLNP 62

  Fly    91 ------GWAL--------NKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFN- 140
                  |:.|        |.|:..                    |:.|||:||:.|..:...|. 
Mouse    63 DEDVHQGFQLLLHNLNKPNNQKYC--------------------LTMANRLFVENTCELLPTFKE 107

  Fly   141 ---TLLYGATKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQW 202
               ...:...::|.|....|...:.||.|::.:|:.:|.|:|..:.|...|.|:||||.|.:|.|
Mouse   108 SCLKFYHSEMEQLSFAEAAEESRQHINMWVSKQTNGKIPDLLPKDSIDSQTRLILANALYFQGTW 172

  Fly   203 LSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPE 267
            ...|:.:.|...||.||::|...|.||.:...|.....:.:|:|::.:||..|            
Mouse   173 YKLFEKDSTKEMPFKINKKETRPVQMMWQEDRFYHAYVKEIQAQVLVMPYEGI------------ 225

  Fly   268 SKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKIELS--LPKFQFEQRLELTPILS 330
               |:|.:::||:.. :.:::|.:.|..:.:..|.:......|||.  |||||.::..::..:|.
Mouse   226 ---DLSFVVLLPDKG-VDISKVENNLTFEKLTAWTKPDFMNGIELHVYLPKFQLQEDYDMNSLLQ 286

  Fly   331 LMGVNTMFTRNATFGDLT--ADPISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTK 393
            .:|:..:|  :.:..||:  :...:|.:.:..|...::|:|.|:.|||||.....:......|..
Mouse   287 HLGILDVF--DGSKADLSGMSTKENLCLSNFVHKCVVEVNEEGTEAAAATAGKTIQCCLGSYPQT 349

  Fly   394 FNCNHPFVFLIYDEKVDTILFAGVYSDP 421
            |..:|||:|.|.....::|||.|.:|.|
Mouse   350 FCADHPFLFFIMHSTTNSILFCGRFSSP 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 106/404 (26%)
Serpinb9dNP_035590.1 serpin 1..377 CDD:393296 110/416 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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