DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpini1

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_033276.1 Gene:Serpini1 / 20713 MGIID:1194506 Length:410 Species:Mus musculus


Alignment Length:443 Identity:117/443 - (26%)
Similarity:203/443 - (45%) Gaps:73/443 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVLLALLPVVTIAALDKPELSFLNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALL 70
            |.||||..|||.|......::             ::|:.:...:|......|:.|||.|...|:.
Mouse     7 LALLALQSVVTGATFPDETIT-------------EWSVNMYNHLRGTGEDENILFSPLSIALAMG 58

  Fly    71 LAYFSSSEQTERELAQALNLGWALNKQQVLVSYTLAQRQDEFRWRQSPMELSS----------AN 125
            :....:...|.:|:..::             .|...:..:||.:.:....::|          ||
Mouse    59 MMELGAQGSTRKEIRHSM-------------GYEGLKGGEEFSFLRDFSNMASAEENQYVMKLAN 110

  Fly   126 RIFVDRTINVSNKFNTLL---YGA-TKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITP 186
            .:||....:|:.:|..:|   :.| ...:||..:.... ..||.|:.:.|::.::|::|.|:...
Mouse   111 SLFVQNGFHVNEEFLQMLKMYFNAEVNHVDFSQNVAVA-NSINKWVENYTNSLLKDLVSPEDFDG 174

  Fly   187 HTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKM------TIDEGLQS 245
            .|.|.|.||.|.||.|.|||:.|.|....|..::..:..:.||::.|.|..      :.:.|...
Mouse   175 VTNLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIY 239

  Fly   246 QIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKI 310
            |::::||               ...:|||::.| :..::.|..:...|.|..:::|......||:
Mouse   240 QVLEIPY---------------EGDEISMMLAL-SRQEVPLATLEPLLKAQLIEEWANSVKKQKV 288

  Fly   311 ELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTA--DPISLVIDDAQHLAKIKVDEVGST 373
            |:.||:|..||.::|..||..:||..:|.::|   :|||  |...|.:..|.|.:.|:|:|.||.
Mouse   289 EVYLPRFTVEQEIDLKDILKALGVTEIFIKDA---NLTAMSDKKELFLSKAVHKSCIEVNEEGSE 350

  Fly   374 AAAAT-ILLVSRSS-RQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDPRQM 424
            ||||: ::.:||.: ..|   :...:|||::||.:.|...|||.|...:|..|
Mouse   351 AAAASGMIAISRMAVLYP---QVIVDHPFLYLIRNRKSGIILFMGRVMNPETM 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 106/404 (26%)
Serpini1NP_033276.1 neuroserpin 23..410 CDD:239003 108/427 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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