DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpinb6b

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_035584.1 Gene:Serpinb6b / 20708 MGIID:894688 Length:377 Species:Mus musculus


Alignment Length:395 Identity:119/395 - (30%)
Similarity:191/395 - (48%) Gaps:28/395 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQQ 98
            :.:....|:|.|:|.:.| ..|.|:.|||.|..:||.:.:..:...|..::||||:|.....|..
Mouse     4 LLEANATFALNLLKTLGE-DSSRNVLFSPISVSSALAMVFMGAKGTTASQMAQALSLDKCSGKGG 67

  Fly    99 VLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFN---TLLYGA-TKELDFKNDPETG 159
            ..|.........|.....:...|.:|||:|.::|.::...|.   ...|.| .:|||||...|..
Mouse    68 RDVHQGFQSLLTETNKTGTQYVLRTANRLFGEKTFDILASFKDSCRKFYEAEMEELDFKGATEQS 132

  Fly   160 LKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQE 224
            .:.||.|:|.||.::|.::|||..:..:|.|||.||.|.||.|..||..|:|...||.:.:...:
Mouse   133 RQHINAWVAKKTEDKITELLSSGSVNSNTPLVLVNAIYFKGNWEKQFNKEDTQEMPFNVTKDVVK 197

  Fly   225 MVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRV 289
            .|.||.:...||||..|.:.:.|:.|||               ..::::|||:||:.: |.|:.|
Mouse   198 PVQMMFQKSTFKMTYVEEISTNILLLPY---------------VGNELNMIIMLPDEH-IELSMV 246

  Fly   290 ISRLNADSVKKW--FERALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRN-ATFGDLTADP 351
            ...:......:|  .::...:::|:.||||:.|:..::..:|..:|:...|... |.|..: |..
Mouse   247 EKEITYKKFIEWTRLDKMEEEEVEVFLPKFKLEENYDMKDVLCRLGMTDAFEEGMADFSGI-ASK 310

  Fly   352 ISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAG 416
            ..|.:....|.:.::|:|.|:.|||||...:......|   .|..||||:|.|...:...|:|.|
Mouse   311 EGLFLSKVIHKSFVEVNEEGTEAAAATAANIGFRCMVP---YFCANHPFLFFIQHSRTSGIVFCG 372

  Fly   417 VYSDP 421
            .:|.|
Mouse   373 RFSSP 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 117/387 (30%)
Serpinb6bNP_035584.1 serpin 1..377 CDD:393296 118/393 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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