DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpina1d

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_033272.1 Gene:Serpina1d / 20703 MGIID:891968 Length:413 Species:Mus musculus


Alignment Length:456 Identity:107/456 - (23%)
Similarity:186/456 - (40%) Gaps:88/456 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TFSLVLLA----LLPVVTIAALDKPELSFLNEFSQ---------------IFKGERDFSLALMKQ 48
            ::||:|||    |:|            |||.|..|               |.....||:|.|.::
Mouse     6 SWSLLLLAGLCCLVP------------SFLAEDVQETDTSQKDQSPASHEIATNLGDFALRLYRE 58

  Fly    49 IREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWA------LNKQQVLVSYTLAQ 107
            :.....:.|:||||.|...|..:....|...|..::.:.|.....      ::|....:..|| .
Mouse    59 LVHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQHLLQTL-N 122

  Fly   108 RQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLLYGATKELDFKN------------DPETGL 160
            |.|      |.::||:.|.:||:..:.:..||..         :.||            :.|...
Mouse   123 RPD------SELQLSTGNGLFVNNDLKLVEKFLE---------EAKNHYQAEVFSVNFAESEEAK 172

  Fly   161 KEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEM 225
            |.|||::...|..:|.:.:  :::...|:..|||....||:|...|..|.|....|.::|.....
Mouse   173 KVINDFVEKGTQGKIVEAV--KKLDQDTVFALANYILFKGKWKQPFDPENTEEAEFHVDESTTVK 235

  Fly   226 VYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVI 290
            |.||..:|...:.....|.|.::.:.|                ..:.:.:.:||:..|  :..:.
Mouse   236 VPMMTLSGMLDVHHCSMLSSWVLLMDY----------------AGNTTAVFLLPDDGK--MQHLE 282

  Fly   291 SRLNADSVKKWFERALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLV 355
            ..||.:.:.::.........::.:|:........|..::|.:|:..:|...|....:|.:...|.
Mouse   283 QTLNKELISQFLLNRRRSDAQIHIPRLSISGNYNLKTLMSPLGITRIFNNGADLSGITEENAPLK 347

  Fly   356 IDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSD 420
            :..|.|.|.:.:||.|:.|||||:|.|:..| .|...:|  :|||:|:|::|...:.:|.|...|
Mouse   348 LSKAVHKAVLTIDETGTEAAAATVLQVATYS-MPPIVRF--DHPFLFIIFEEHTQSPIFVGKVVD 409

  Fly   421 P 421
            |
Mouse   410 P 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 93/404 (23%)
Serpina1dNP_033272.1 serpinA1_A1AT 44..412 CDD:381012 95/406 (23%)
RCL 368..387 8/21 (38%)

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