DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Eb and Serpina1b

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_033270.3 Gene:Serpina1b / 20701 MGIID:891970 Length:413 Species:Mus musculus


Alignment Length:400 Identity:93/400 - (23%)
Similarity:167/400 - (41%) Gaps:57/400 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWA------LNKQQ 98
            ||:::|.:::.....:.|:||||.|...|..:....|...|..::.:.|.....      ::|..
Mouse    50 DFAISLYRELVHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSF 114

  Fly    99 VLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLLYGATKELDFKN--------- 154
            ..:..|| .|.|      |.::||:.|.:||:..:.:..||..         :.||         
Mouse   115 QHLLQTL-NRPD------SELQLSTGNGLFVNNDLKLVEKFLE---------EAKNHYQAEVFSV 163

  Fly   155 ---DPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPF 216
               :.|...|.|||::...|..:|.:.:  :|:...|:..|||....||:|...|..|.|....|
Mouse   164 NFAESEEAKKVINDFVEKGTQGKIVEAV--KELDQDTVFALANYILFKGKWKKPFDPENTEEAEF 226

  Fly   217 FINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNS 281
            .:::.....|.||..:|...:.....|.|.::.:.|                ..:.|.:.:||..
Mouse   227 HVDKSTTVKVPMMMLSGMLDVHHCSILSSWVLLMDY----------------AGNASAVFLLPED 275

  Fly   282 NKISLNRVISRLNADSVKKWFERALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGD 346
            .|  :..:...||.:.:.|.......:.:::.:|:........|..::|.:|:..:|...|....
Mouse   276 GK--MQHLEQTLNKELISKILLNRRRRLVQIHIPRLSISGDYNLKTLMSPLGITRIFNNGADLSG 338

  Fly   347 LTADPISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDT 411
            :|.:...|.:..|.|.|.:.:||.|:.|||||:......| .|...:|  :|||:|:|::|...:
Mouse   339 ITEENAPLKLSKAVHKAVLTIDETGTEAAAATVFEAVPMS-MPPILRF--DHPFLFIIFEEHTQS 400

  Fly   412 ILFAGVYSDP 421
            .:|.|...||
Mouse   401 PIFVGKVVDP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 91/398 (23%)
Serpina1bNP_033270.3 serpinA1_A1AT 44..412 CDD:381012 92/399 (23%)
RCL 368..387 6/21 (29%)

Return to query results.
Submit another query.